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Method for detecting salmonella typhimurium based on BCA-RPA and CRISPR-Cas12a system

A technology for Salmonella and Typhimurium, applied in the field of detection of Salmonella Typhimurium, can solve the problems of barcode DNA loss, reduced sensitivity, complicated process, etc., and achieves the effects of improving specificity, improving sensitivity, and reducing pollution

Active Publication Date: 2021-08-17
NINGBO UNIV
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

Therefore, many biological barcode detection methods have been developed for the rapid detection of biological and chemical contamination in food, and the detection limit of BCA is 1000 times lower than that of conventional ELISA kits
However, BCA usually requires complex steps to release barcoded DNA from the surface of AuNPs probes, which complicates the process and may result in the loss of barcoded DNA, thereby reducing the sensitivity.
At present, there are no relevant research reports on the method of visual detection of Salmonella typhimurium using biological barcode detection technology combined with recombinase polymerase amplification technology and CRISPR-Cas12a system at home and abroad

Method used

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  • Method for detecting salmonella typhimurium based on BCA-RPA and CRISPR-Cas12a system
  • Method for detecting salmonella typhimurium based on BCA-RPA and CRISPR-Cas12a system
  • Method for detecting salmonella typhimurium based on BCA-RPA and CRISPR-Cas12a system

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specific Embodiment 1

[0035] A method for detecting Salmonella typhimurium based on BCA-RPA and CRISPR-Cas12a system, such as figure 1 shown, including the following steps:

[0036] (1) Synthesis of AuNPs probes

[0037] A. Add 100 mL of 1 mM HAuCl 4 After the aqueous solution was heated to boiling with magnetic stirring, 10 mL of 38.8 mM trisodium citrate aqueous solution was added, and the heating was stopped when the solution turned from light yellow to wine red, and the magnetic stirring was continued for 15 minutes to obtain the AuNPs solution, which was stored at 4 °C in the dark for later use ;

[0038] B. Dilute the AuNPs solution with Na 2 CO 3 After the pH of the solution was adjusted to 7.4, 10 μL of 1 mg / mL monoclonal antibody solution against typhoid fever was added, and the ligated DNA was added to a final concentration of 3 μM, reacted at -80 °C for 15 minutes, at 9000 rpm, 4 Centrifuge at ℃ for 15 minutes to remove the supernatant, disperse the precipitate in 1 mL of 0.01 M ph...

specific Embodiment 2

[0049] In order to verify the value of specific embodiment one detection method of the present invention in practical application, in milk, add Salmonella typhimurium standard solution as actual sample, the Salmonella typhimurium of different concentrations in milk is detected, and the result is as follows: Figure 5 , 6 shown;

[0050] Depend on Figure 5 It can be seen that different concentrations (10 0 -10 6 CFU / mL) in the presence of Salmonella typhimurium, the results can be read with naked eyes, and can be used for the detection of Salmonella typhimurium in actual samples.

[0051] Depend on Image 6 It can be seen that the method of the present invention detects Salmonella typhimurium in milk, and the fluorescence intensity of different concentrations of Salmonella typhimurium has a linear relationship with the concentration of Salmonella typhimurium. The correlation coefficient R=0.990, and the linear relationship is good.

specific Embodiment 3

[0053] Figure 7 For specific embodiment one detection method respectively to 10 5 CFU / mL Salmonella typhimurium, 10 5 CFU / mL Escherichia coli, 10 5 CFU / mL Listeria monocytogenes, 3×10 5 CFU / mL Salmonella typhimurium: 3×10 5 CFU / mL Escherichia coli: 3×10 5 CFU / mL Listeria monocytogenes=1:1:1 detects the fluorescence intensity value; Figure 7 It can be seen that when Salmonella typhimurium exists, the detected fluorescence intensity value is far greater than the fluorescence intensity value of interfering foodborne pathogens, indicating that the sensor has specific detection for Salmonella typhimurium.

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Abstract

The invention discloses a method for detecting salmonella typhimurium based on BCA-RPA and a CRISPR-Cas12a system. The method is characterized by comprising the following steps: simultaneously adding a nano-magnetic bead probe solution and an AuNPs probe solution into a to-be-detected solution containing salmonella typhimurium, conducting oscillating and reacting at room temperature for 45 minutes, performing magnetic separating and washing three times, and conducting re-dissolving in enzyme-free water so as to obtain an MNB probe-bacterium-AuNPs probe sandwich structure; and carrying out a RPA amplification reaction on the MNB probe-bacterium-AuNPs probe sandwich structure at 37 DEG C for 5 minutes, observing fluorescence under blue light after the reaction is finished or carrying out naked-eye detection or quantitative detection by using a microplate reader, and determining the concentration value of salmonella typhimurium in a to-be-detected solution according to a curve which is obtained according to fluorescence intensity values corresponding to different concentrations of salmonella typhimurium. The method provided by the invention has the advantages of simplicity, convenience, rapidness, high sensitivity and visual detection.

Description

technical field [0001] The invention relates to a method for detecting Salmonella typhimurium, in particular to a method for detecting Salmonella typhimurium based on BCA-RPA and CRISPR-Cas12a systems. Background technique [0002] Salmonella typhimurium ( S. typhimurium ) is one of the main causes of food-borne diseases and has caused a huge threat to human health. Eating food contaminated with Salmonella typhimurium can cause vomiting, diarrhea, and even death. About 80% of outbreaks of foodborne pathogenic bacteria in China are caused by Salmonella typhimurium. Therefore, it is very important to establish a sensitive and rapid identification method for Salmonella typhimurium to effectively ensure the food safety of the food industry and individuals. [0003] Existing methods for detecting food-borne pathogens include: conventional culture method, enzyme-linked immunoassay (ELISA), polymerase chain reaction (PCR), etc. The conventional culture method is still the relia...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/689C12Q1/6804C12Q1/6844C12Q1/10C12R1/42
CPCC12Q1/689C12Q1/6804C12Q1/6844C12Q2563/185C12Q2563/131C12Q2563/143C12Q2563/155C12Q2521/507C12Q2521/327C12Q2525/161C12Q2563/107
Inventor 乔朝晖蔡琪琦孙梦妮马娜张进杰杨文鸽
Owner NINGBO UNIV