This invention provides a method for producing a freeze-dried vaccine containing attenuated Bordetellabacteria. [Solution] A method for producing a freeze-dried vaccine includes the steps of: collecting Bordetellabacteria from a culture; mixing the collected Bordetellabacteria with a freeze-drying buffer; freeze-drying the mixture of Bordetella bacteria and the freeze-drying buffer, wherein the holding time between the collection step and the freeze-drying step is less than 48 hours, and the freeze-drying step includes a pre-crystallization holding step, in which the mixture of Bordetella bacteria and the freeze-drying buffer is held for 0.5 to 10 hours at a temperature 0.1 to 10°C higher than the crystallization temperature of the mixture before further cooling; and collecting the freeze-dried Bordetella bacteria.