Method for extracting hybrid total RNA for gene chips from animal dispose tissues
A gene chip hybridization and animal fat technology, applied in the field of gene chip research involving the extraction of total RNA samples from animal fat tissue, can solve the problems of low RNA yield, inconvenient purchase, high price, etc. The method is simple and easy to achieve , Reagents are economical and easy to operate
- Summary
- Abstract
- Description
- Claims
- Application Information
AI Technical Summary
Problems solved by technology
Method used
Image
Examples
Embodiment 1
[0027] Embodiment 1. A method for extracting total RNA for gene chip hybridization from pig subcutaneous fat, the following steps are carried out in sequence, and the following steps 1) to 6) are all carried out in a state without RNase contamination:
[0028] 1), tissue grinding and Trizol lysis:
[0029] Cut about 100 mg of pig subcutaneous fat tissue into a mortar, grind it into a powder in a liquid nitrogen environment, put it into a 1.5 ml eppendorf tube, then add 1 ml of Trizol and shake vigorously for about 5 minutes; make it fully lysed to obtain lysed tissue;
[0030] 2), chloroform extraction:
[0031] Add 200 μl chloroform to the lysed tissue obtained in step 1) for RNA extraction, shake vigorously for 3 minutes, wait until it is fully mixed, place it at room temperature for 5 minutes, and then centrifuge at 15300rmp for 15 minutes at 4°C; after centrifugation, obvious layers can be seen, and the upper layer is clear Liquid (i.e. supernatant, about 600μl);
[0032...
Embodiment 2
[0040] Embodiment 2, the total RNA concentration determination of extracting and in order to be used for the quality detection of gene chip hybridization (using the solution obtained in Example 1 as a sample):
[0041] 1) nanodrop-1000spectrophotometry measures the optical density and RNA concentration of the sample at 260, 280 and 230 nm, and calculates the purity of the RNA.
[0042] 2) Electrophoresis detection: ①RNA denaturation: Take RNase-free 1.5ml centrifuge tube, add 1.5μL RNA, 5.5μL RNA denaturation buffer, denature at 65℃ for 20min, centrifuge slightly, add 1.5μL 6×loading buffer (for RNA).
[0043] ②Agarose gel electrophoresis: prepare 2% agarose gel, 100V constant voltage, 10min electrophoresis. ③ RNA electrophoresis images were photographed and analyzed.
[0044] 3) RNA integrity analysis: Agilent 2100 bioanalyzer detects the integrity of RNA and scores the RNA quality.
[0045] Total RNA quality test results: using nanodrop-1000spectrophotometry for detection,...
PUM
Login to View More Abstract
Description
Claims
Application Information
Login to View More 