Rice temperature sensitive male sterility gene, coding protein and application thereof
A male sterility gene and gene technology, applied in the application, genetic engineering, plant genetic improvement and other directions, can solve the problems of single genotype, hidden dangers of plant growth and adaptability, and limited application scope.
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Embodiment 1
[0024] Embodiment one: OsATMS1 Gene acquisition: After using the BLAST software provided by the Rice Genome Annotation Project website to compare the gene database of the website, the ATMS1 The rice gene with the highest homology OsATMS1 , its Gene ID is LOC_Os04g24530, and then the base sequence of the gene and the amino acid sequence of its encoded protein are obtained.
Embodiment 2
[0025] Example 2: Bioinformatics method analysis OsATMS1 Structure of genes and their proteins: BLAST analysis with RGAP 6.1, rice OsATMS1 Genes and Arabidopsis ATMS1 The homology of the gene is very high, and the expected value reaches 1.8e-27. The protein sequence was obtained from the Rice Genome Annotation Project. Analysis by Vector NTI 9.1.0 software showed that the protein contained 555 amino acids, the protein molecular weight was about 59.4kDa, and the isoelectric point was 5.69. Use CN3D 4.1 software to OsATMS1 The three-dimensional structure analysis of the protein encoded by the gene shows that the protein contains tetracoumaric acid-CoA ligase domain and acetyl protein synthetase domain, which are the characteristics of fatty acyl-CoA synthetase, indicating that the protein is fatty acyl-CoA synthetase domain. Coenzyme A synthetase, see figure 1 . Evolutionary analysis showed that, OsATMS1 The protein encoded by the gene belongs to the ACOS family of a...
Embodiment 3
[0026] Embodiment three: OsATMS1 Detection and analysis of temperature-sensitive characteristics of genes: first treat rice in artificial light culture room at 20°C and 30°C, and then use traditional phenol: chloroform: isoamyl alcohol, sodium acetate chromatography and isopropanol precipitation to extract the treated rice The total RNA of the inflorescence was then reverse-transcribed into cDNA using Invitrogen’s M-MLV First Strand Kit (cat no. c28025-032, lot no. 8210069). According to the sequence at both ends of the intron of the target gene, the positions 1117 and 1772 The upstream and downstream primers shown below were designed at the points, and detected by agarose gel electrophoresis after PCR amplification.
[0027] Sense primer: TTCATCCTGCCGAACCTG
[0028] Anti-sense primer: ACGCCACTATCTCCTCCT
[0029] Electrophoresis results showed that: in rice OsATMS1 Transcript expression at 20°C is higher than at 30°C, see image 3 . The figure shows that the amount of t...
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