Marker for diagnosing and treating lung adenocarcinoma
A lung adenocarcinoma and drug technology, applied in the field of biomedicine, can solve the problems of unclear molecular biological mechanism of lung adenocarcinoma, difficult to distinguish, poor prognosis of lung adenocarcinoma, etc.
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Embodiment 1
[0061] Example 1 Screening for Gene Markers Related to Lung Adenocarcinoma
[0062] 1. Sample collection
[0063] Paracancerous tissue and lung adenocarcinoma tissue samples were collected from 8 cases of lung adenocarcinoma. The above-mentioned samples are surgical resection specimens of patients with lung adenocarcinoma, and all the above-mentioned samples were obtained with the consent of the organizational ethics committee.
[0064] 2. RNA sample preparation (using miRNAkit for operation)
[0065] The tissues obtained above were shredded, put into liquid nitrogen and ground into powder, and RNA was extracted and isolated according to the instructions in the kit. details as follows:
[0066] 1) Isolation of RNA:
[0067] A. Add in tissue homogenate or cells Reagent II 1ml;
[0068] B. Stand at room temperature for 3 minutes, add 0.2ml chloroform and shake vigorously for 15 seconds;
[0069] C. Place on ice for 10 minutes;
[0070] D. Centrifuge at 12000g for 15mi...
Embodiment 2
[0086] Example 2 QPCR sequencing to verify the differential expression of the PLD5 gene
[0087] 1. Large-sample QPCR verification of differential expression of PLD5 gene. According to the sample collection method in Example 1, 50 cases of lung adenocarcinoma paracancerous tissues and 50 cases of lung adenocarcinoma tissues were selected.
[0088] 2. The RNA extraction steps are as described in Example 1.
[0089] 3. Reverse transcription:
[0090] 1) Reaction system:
[0091] Reagent
volume
MgCl 2
2μl
10×RT Buffer
1μl
RNase-free water
3.75μl
dNTP mix
1μl
RNase inhibitor
0.25μl
0.5μl
Oligo-dT Adapter Primer
0.5μl
Experimental sample
1μl
[0092] 2) Reverse transcription reaction conditions
[0093] According to the reverse transcription reaction conditions in RNAPCRKit (AMV) Ver.3.0.
[0094] 42°C~55°C for 60 minutes, 99°C for 2 minutes, ...
Embodiment 3
[0112] Effect of embodiment 3siRNA on PLD5 gene expression
[0113] 1. Cell culture
[0114] Human lung adenocarcinoma cell line A549 was incubated in RPMI1640 medium containing 10% fetal bovine serum and 1% P / S at 37°C, 5% CO 2 , Cultivated in an incubator with a relative humidity of 90%. Change the medium once every 2-3 days, and use 0.25% EDTA-containing trypsin for routine digestion and passage.
[0115] 2. siRNA design
[0116] siRNA sequence against PLD5:
[0117] Negative control siRNA sequence (siRNA-NC):
[0118] The sense strand is 5'-UUCUCCGAACGUGUCACGU-3' (SEQ ID NO.7),
[0119] The antisense strand is 5'-ACGUGACACGUUCGGAGAA-3' (SEQ ID NO.8);
[0120] siRNA1-PLD5:
[0121] The sense strand is 5'-UGAAAUGGUGCAUUUUCUGAA-3' (SEQ ID NO.9),
[0122] The antisense strand is 5'-CAGAAAAUGCACCAUUUCACU-3' (SEQ ID NO.10);
[0123] siRNA2-PLD5:
[0124] The sense strand is 5'-AGUGAAAUGGUGCAUUUUCUG-3' (SEQ ID NO.11),
[0125] The antisense strand is 5'-GAAAAUGCACCAUUU...
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