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LAMP primer composite for detecting respiratory pathogens and kit of LAMP primer composite

A primer composition and primer set technology, applied in the field of nucleic acid amplification, can solve the problems of difficult on-site detection, time-consuming and laborious, cumbersome operation process, etc., and achieve the effect of easy operation

Inactive Publication Date: 2017-08-29
SHANGHAI IGENETEC DIAGNOSTICS CO LTD
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

Among them, the indirect immunofluorescence method requires the help of a fluorescent microscope, and the judgment results require experienced testing personnel; although colloidal gold detection is fast, its sensitivity is not high, and false negative results are prone to occur
The specificity and sensitivity of enzyme-linked immunoassay are not high, and the operation process is cumbersome, time-consuming and laborious
Fluorescent PCR method can detect pathogenic nucleic acid more accurately, but multiple fluorescent PCR products can detect up to 3 targets, the detection time is long, the detection system and operation process are relatively complicated, it is difficult to carry out on-site detection, and professional personnel are required to operate specific detection instruments, etc.
[0008] At present, many studies combine loop-mediated constant temperature amplification with microfluidic chips to quickly detect pathogenic nucleic acids, tumor marker genes, drug resistance sites, etc., but the above studies need to use other instruments to judge the results

Method used

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  • LAMP primer composite for detecting respiratory pathogens and kit of LAMP primer composite
  • LAMP primer composite for detecting respiratory pathogens and kit of LAMP primer composite
  • LAMP primer composite for detecting respiratory pathogens and kit of LAMP primer composite

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0072] This example describes the microfluidic chip used in the present invention.

[0073] Such as figure 1 As shown, the microfluidic chip used in the present invention is a disc-shaped microfluidic chip, which includes four reaction detection parts 2, and each reaction detection part 2 includes a sample injection hole 21, a liquid storage area 22, and a reserved area 23 , reaction hole 24, ball valve 25, waste liquid tank 26, exhaust hole 27, first arc channel 28 and second arc channel 29, above-mentioned first arc channel 28 and second arc channel 29 are located on the film 1 , the first arc channel 28 connects the reserved area 23 and the exhaust hole 27, the second arc channel 29 connects the sample hole 21, the liquid storage area 22 and the reserved area 23, and the above-mentioned ball valve 25 is located in the reserved area 23 and the reaction Between wells 2, each reaction detection section has 8 reaction wells.

[0074] The above-mentioned microfluidic chip perf...

Embodiment 2

[0077] This example is the LAMP primer composition and kit used in the present invention for detecting respiratory pathogens.

[0078] The LAMMP primer composition of the present invention includes at least one of the six pathogen primer sets. The respiratory pathogens include at least one of the following six pathogens: Mycoplasma pneumoniae, Chlamydia pneumoniae, influenza A / B virus, parainfluenza virus, adenovirus, respiratory syncytial virus. The six primer sets corresponding to the above pathogens are Mycoplasma pneumoniae primer set, Chlamydia pneumoniae primer set, Influenza A / B virus primer set, Parainfluenza virus primer set, Adenovirus primer set, Respiratory syncytial virus primer set, the primer set Quality control primer sets (negative quality control, positive quality control) are also included. See Table 1 for details of the primer sequences of the above primer sets.

[0079]The present invention relates to a kit containing the above-mentioned LAMP primer comp...

Embodiment 3

[0081] This embodiment is a non-diagnostic method for detecting respiratory pathogens using the primer composition and kit described in Embodiment 2, which includes the following steps:

[0082] 1. Cleaning steps of the microfluidic chip;

[0083] The microfluidic chip is cleaned by plasma, and the surface of the microfluidic chip is washed with a plasma cleaner, and air-dried with an inert gas.

[0084] 2. Coating of primer composition;

[0085] Such as figure 2 and image 3 As shown, the Mycoplasma pneumoniae primer set, Chlamydia pneumoniae primer set, Influenza A / B virus primer set, Parainfluenza virus primer set, Adenovirus primer set, Respiratory syncytial virus primer set, quality control primer set were mixed with agarose , prepared into a corresponding mixed solution, in the above mixed solution, containing 4-8 μM inner primer 1, 4-8 μM inner primer 2, 1 μM outer primer 1, 1 μM outer primer 2, the final concentration of agarose in the mixed solution is 0.1% (mass...

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Abstract

The invention relates to a primer composite for detecting respiratory pathogens. The primer composite comprises at least one group of a mycoplasma pneumoniae group, a chlamydia pneumoniae primer group, an influenza A / B virus primer group, a parainfluenza virus primer group, an adenovirus primer group and a respiratory syncytial virus primer group. The invention further relates to a kit comprising the primer composite. The kit further comprises a micro-fluidic chip wrapping primers, and a macroscopic indicator. The invention further relates to a detection method adopting the primer composite. The detection method comprises the steps of primer composite coating, to-be-detected sample nucleic acid extraction, LAMP reaction and visual result interpretation. The kit and the method are applied to the micro-fluidic chip for visual judgment, instant detection of the seven respiratory pathogens is rapidly and accurately realized, and a result is judged by a naked eye by color change, so that the kit and the method are simpler, more convenient and quicker in practical applications, are easy to operate, and are suitable for site operation.

Description

technical field [0001] The invention belongs to the technical field of nucleic acid amplification, and in particular relates to a LAMP primer composition for detecting respiratory pathogens, a kit for detecting respiratory pathogens based on a microfluidic chip system and a method thereof. Background technique [0002] Respiratory tract infection is a common infectious disease in my country, which refers to pathogens infecting the respiratory system such as the nasal cavity, throat, trachea and bronchi of the human body. Upper respiratory tract infection is mainly caused by viruses, which refers to inflammation of the nasal cavity, pharynx or larynx. The most common is acute upper respiratory tract infection, which is highly contagious and can cause serious complications. Lower respiratory tract infections are caused by microorganisms such as viruses, bacteria, mycoplasma, and chlamydia. Lower respiratory tract infections include bronchitis, pneumonia, etc. If the pathogen c...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/70C12Q1/68C12Q1/04C12N15/11C12R1/01C12R1/35C12R1/93
CPCC12Q1/6844C12Q1/689C12Q1/701C12Q2600/166C12Q2531/119C12Q2565/629
Inventor 方雪恩王欣珍王雄杨茜孔继烈
Owner SHANGHAI IGENETEC DIAGNOSTICS CO LTD
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