Broad-spectrum lyase derived from salmonella bacteriophage and antibacterial application thereof
A bacteriophage lyase and salmonella technology, which is applied in the field of broad-spectrum lyase and its antibacterial application, can solve the problem of inability to kill gram-positive bacteria and the like, and achieve the effect of significant bactericidal effect
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[0030] Example 1: Extraction of Salmonella phage SLMP1 genome
[0031] 1. Preparation of Salmonella phage SLMP1 particles
[0032] A single colony of Salmonella (ATCC14028) was picked from the solid medium, inoculated into 15 mL of LB liquid medium, and cultured with shaking at 36°C for 6-8 hours. Pick a single Salmonella phage SLMP1 plaque, inoculate it in 15mL of the logarithmic growth phase host bacteria culture medium, shake and culture at 36°C for 4-6h, then centrifuge the lysate at 8000rpm for 10min, and filter the supernatant with a 0.22μm filter. , which is the pure phage culture medium. The Salmonella cultured overnight was transferred to 400 mL of liquid LB medium, the inoculum amount was 1%, cultured to the logarithmic growth phase, 10 mL of phage pure culture solution was added, and the culture was shaken until the host bacteria lysed and became clear. DNase I and RNase A were added to a final concentration of 1 mg / L and incubated at room temperature for 30 min. ...
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[0035] Example 2. Functional annotation of the lyase gene lysSP1
[0036] The extracted phage genomic DNA is sent to a bio-company for whole genome sequencing, the genome is predicted by RAST tool, the ORF sequence predicted by the sample is converted into a protein sequence by the transeq program in EMBOSS, and the protein sequence is compared with public data. , the amino acid sequence (SEQ ID No.1) encoded by the gene (SEQ ID No.2) was found to be highly similar to the lyases of several Salmonella phages through homology analysis. At present, there are no reports on the research and application of these highly similar lyases.
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[0037] Embodiment 3, the construction of recombinant plasmid
[0038] 1. Amplification of the lyase gene lysSP1: Design primers according to the sequence of lysSP1 (SEQ ID No. 2), add double restriction enzyme sites BamH I, Hind III and protective base TTT at the 5' end, upstream primer: 5'- TTTGGATCCatgtcaaaccgaaacatcag-3', downstream primer: 5'-TTTAAGCTTctttgccgcgcgccctac-3'. PCR was used to amplify lysSP1, and electrophoresis was performed in 1.5% agarose to identify the size of the amplified fragment. At the same time, the amplified product was sent to a biological company for sequencing, and the amplified fragment was determined as the target fragment.
[0039] 2. TA cloning of the lyase gene lysSP1: The PCR product was recovered with a gel recovery kit, mixed with the pMD18-T cloning vector, and transferred into 100 μL of E. coli DH5α competent cells, and the mixture was placed on ice for 30 min at 42°C Heat shock for 45 s, then place on ice for 1 min, add 890 μL LB li...
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