Peach transcription factor pphb G7 gene, protein, recombinant expression vector and application thereof
A gene and application technology, applied in the fields of application, genetic engineering, plant genetic improvement, etc., can solve the problem of HB gene shortage, achieve the effects of extending shelf life, achieving environmental friendliness, and reducing agricultural costs
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Embodiment 1
[0033] Example 1 Identification of the HB family of peach and other fruit trees
[0034] A large number of HB genes were isolated from the peach genome (version 1), and their nucleotide and amino acid sequences were downloaded from the Rosaceae Genome Database (GDR; http: / / www.rosaceae.org / ), and the obtained amino acids Sequences were screened to obtain members of the HB family in the peach genome. At the same time, pear (Pyrus bretschneideri; http: / / peargenome.njau.edu.cn / ), raspberry (Rubus occidentalis; GDR), strawberry (Fragaria × ananassa), citrus (Citrus sinensis), grape (Vitis vinifera), Search and download all members of the HB family from gene banks such as papaya (Carica papaya). Finally, all the genes found are in the National Center for Biotechnology Information (NCBI; https: / / www.ncbi.nlm.nih.gov)) Further comparison of their homology.
Embodiment 2
[0035] Example 2 Sequence and phylogenetic tree analysis
[0036] The amino acid sequences of the above-screened genes were downloaded and aligned by the Culstal X method, and a phylogenetic tree based on Mega-Weighted Neighbor-Joining (NJ) was constructed using the software MEGA6. Seventy HB genes were isolated from the peach genome, and together with the Hb genes in pear, strawberry, citrus, papaya and grape, a phylogenetic tree was constructed. The results showed that: 398 HB genes can be divided into two classes I and II, which have 5 groups (A-E) and 2 groups (F and G) ( figure 1 ). These genes were further divided into 67 clusters besides group D, namely A1→A20, B1, B2, C1→C3, E1→E13, F1→F10 and G1→G19. Sequence alignment in NCBI showed that group A contained three previously reported families, BEL (A1→A11), KNOX (A12→A18) and PHD (A19 and A20). Groups C, D and F were similar to the DDT, SAWDEE and WOX families, respectively. Group E contains two subfamilies HD-ZIP I...
Embodiment 3
[0043] Example 3 Expression profile of HB gene in peach fruit
[0044] According to the transcriptome data, 10 varieties including Baixianglu, Zaobaifeng, Chiyuanmi, Chunmei, Xiahui No. 2, Yuhualu, Chunxue, Baifeng, Hujing Milu and Xiahui No. 6 were used. The expression levels of 70 genes were analyzed at the transcriptional level at S1-S3) and mature (S4) stages. The results showed that the expression of two genes PpHB.G2 and PpHB.G7 during fruit ripening was higher than that during fruit development, while five genes PpHB.A11, PpHB.E1, PpHB.E12, PpHB.E13 and PpHB.F4 were expressed in The lowest expression level during fruit ripening ( figure 2 A). In order to verify the expression levels of these seven genes, qRT-PCR technology was used to detect the expression levels of these seven genes in the fruit development and ripening stages of Zhongyou No. 4 peach. The results showed that the expression levels of PpHB.A11, PpHB.E12, and PpHB.E13 were not significantly different ...
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