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Multiplex PCR detection primers, kits, methods and applications for identifying persistent Listeria monocytogenes st121

A mononuclear cell proliferation and detection kit technology, applied in the biological field, can solve problems such as reducing the throughput of multiplex PCR detection, and achieve the effects of saving reagent usage, improving detection efficiency, and simple and quick steps.

Active Publication Date: 2022-02-22
GUANGDONG INST OF MICROBIOLOGY GUANGDONG DETECTION CENT OF MICROBIOLOGY
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

As the number of primer pairs increases, the inhibitory effect between primers reduces the detection throughput of multiplex PCR. Problems such as the formation of dimers and the optimization of the PCR reaction system to achieve effective amplification of each target DNA sequence limit the application of multiplex PCR technology.

Method used

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  • Multiplex PCR detection primers, kits, methods and applications for identifying persistent Listeria monocytogenes st121
  • Multiplex PCR detection primers, kits, methods and applications for identifying persistent Listeria monocytogenes st121
  • Multiplex PCR detection primers, kits, methods and applications for identifying persistent Listeria monocytogenes st121

Examples

Experimental program
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Effect test

Embodiment 1

[0033] Example 1 Single multiplex PCR system specific detection

[0034] The multiplex PCR kit for detecting the ST121 strain of Listeria monocytogenes, including conventional multiplex PCR components, also includes specific primers for the ST121 strain of Listeria monocytogenes, the specific primer sequences are shown in Table 1, routine Multiplex PCR kit including Taq DNA polymerase, MgCl 2 , PCR amplification buffer, dNTPs and deionized water.

[0035] Table 1 is aimed at the specific primer of Listeria monocytogenes ST121 strain

[0036]

[0037] Specific detection of single-plex PCR system: PCR amplification method of single primer pair + single template is used to amplify each target DNA sequence of Listeria monocytogenes ST121 strain. The templates of 0609, 0171 and prfA are all used For the genomic DNA of Listeria cellulogenes ST121 strain, the template DNA concentration is 20 ng / μL. Single-plex PCR adopts 25 μL reaction system, including: upstream and downstream...

Embodiment 2

[0038] The specific detection of embodiment 2 multiplex PCR system

[0039] 1. Specific detection of multiplex PCR system: multiple target DNA sequences of ST121 strain (Listeria monocytogenes ST121 strain) were amplified using multiple primer pairs + single template PCR amplification method, 0609, 0171, prfA Genomic DNA of the ST121 strain was used as the template, and the template DNA concentration was 20 ng / μL. Multiplex PCR uses 25 μL reaction system, including: 0.5 μL each of multiplex PCR primers 0609-F, 0609-R, 0171-F, 0171-R, prfA-F and prfA-R at a concentration of 10 μmol / L, 2.5 U / μL Taq DNA polymerase 0.5μL, 25mmol / L MgCl 2 2 μL, 2 μL of 10 mmol / L dNTP, 5 μL of 5×PCR amplification buffer, 2 μL of DNA template, and 10.5 μL of sterile deionized water. Multiplex PCR amplification conditions were: pre-denaturation at 95°C for 5 min; denaturation at 95°C for 30 s, annealing at 57°C for 50 s, extension at 72°C for 60 s, and 35 cycles of amplification; finally, extension...

Embodiment 3

[0041] The detection of embodiment 3 multiplex PCR system in the artificial pollution sample

[0042] The 10-fold dilution method was used to carry out 10-fold serial dilution of the overnight-cultured Listeria monocytogenes ST121 strain, and sequentially obtained 2.5×10 8 cfu / mL, 2.5×10 7 cfu / mL, 2.5×10 6 cfu / mL, 2.5×10 5 cfu / mL, 2.5×10 4 cfu / mL, 2.5×10 3 cfu / mL, 2.5×10 2 cfu / mL, 2.5×10 1 cfu / mL, 2.5×100cfu / mL, take 1mL concentration as 2.5×10 4 cfu / mL, 2.5×10 3 cfu / mL, 2.5×10 2 cfu / mL, 2.5×10 1 Cfu / mL, 2.5×100cfu / mL Listeria monocytogenes ST121 strain was added to 9mL of milk, then added to 90mL of BHI medium and cultured for 4h, 6h, 8h, 10h and 12h, and then extracted by bacterial genome Kit for genomic DNA extraction. Take 2 μL of genomic DNA as a template for multiplex PCR reactions. Multiplex PCR uses 25 μL reaction system, including: 0.5 μL each of multiplex PCR primers 0609-F, 0609-R, 0171-F, 0171-R, prfA-F and prfA-R at a concentration of 10 μmol / L, 2.5 U / ...

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Abstract

The invention discloses a multiplex PCR detection primer, a kit, a method and an application for identifying persistent Listeria monocytogenes ST121 strain. The multiplex PCR detection method of the present invention includes detection target multiplex PCR primer design, multiplex PCR system amplification and electrophoresis detection. If the target gene 0609, 0171, and prfA bands appear in the result at the same time, it is proved that the bacterial strain is persistent monocytogenes. Species ST121 strain, if any two of the three bands of the target gene 0609, 0171, and prfA appear in the result, it is other ST-type Listeria monocytogenes; if only the prfA gene band appears in the result, it is Listeria monocytogenes bacteria. The invention can effectively identify the persistent Listeria monocytogenes ST121 strain, has the advantages of rapidity, high efficiency, high sensitivity, economy, accuracy, simple operation, etc., and is convenient to be applied in the fields of food, inspection and quarantine, and the like.

Description

technical field [0001] The invention belongs to the field of biotechnology, and in particular relates to a multiplex PCR detection primer, a kit, a method and an application for identifying persistent Listeria monocytogenes ST121 strain. Background technique [0002] Multiplex PCR is a PCR technology based on ordinary PCR in which multiple pairs of specific primers are used to simultaneously amplify multiple segments of specific detection target DNA in the same reaction system. Since multiplex PCR was reported, due to its high efficiency, sensitivity and economic simplicity, it has been widely used in many fields of nucleic acid detection, such as transgene identification, pathogen detection, genetic disease diagnosis, single nucleotide polymorphism analysis, etc.; Multiplex PCR system generally includes the following reagents: PCR buffer, Taq enzyme, dNTP, MgCl 2 , primers, template and deionized water. [0003] Listeria monocytogenes (LM) is an important food-borne patho...

Claims

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Application Information

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Patent Type & Authority Patents(China)
IPC IPC(8): C12Q1/689C12Q1/04C12N15/11C12R1/01
Inventor 陈谋通吴清平张菊梅程健恒庞锐陈月桃曾海燕王涓丁郁吴诗
Owner GUANGDONG INST OF MICROBIOLOGY GUANGDONG DETECTION CENT OF MICROBIOLOGY