Magnetic DNA fluorescent probe and preparation method thereof

A fluorescent probe, -NH2-DNA technology, applied in the field of bioengineering, can solve the problems of lack of fluorescence intensity, inability to detect multiple components at the same time, time-consuming and laborious, etc., achieve a wide spectral excitation range, and realize multiple labeling. , the effect of increasing the transfer efficiency

Inactive Publication Date: 2009-12-16
TIANJIN POLYTECHNIC UNIV
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

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Problems solved by technology

However, the use of this donor-acceptor pair still has the following disadvantages: 1. Their excitation spectra are narrow, and it is difficult to excite multiple components at the same time; 2. The organic fluorescent molecules of organic dyes have a wide spectrum and asymmetric distribution, giving It is difficult to distinguish the source of organic fluorescent molecules of different probe molecules, and it is impossible to detect multiple components at the same time; 3. Specific wavelength excitation is required to emit fluorescence. If multiple diseases are detected at the same time, light excitation with different wavelengths is required.
The disadvantage is that the effective signal obtained by using DABCYL as a quencher is low, and compared with the background signal (noise signal), its energy transfer efficiency needs to be further improved; while DABCYL is still unavoidable as an organic fluorescent dye. There are the above disadvantages
[0010] In recent years, studies have shown that the quantum dot-Au sensing system still has the following shortcomings: using core-shell quantum dots such as CdTe, CdS, ZnS or CdTe / ZnS, CdTe / CdS as energy donors, in actual biological detection, often Insufficient fluorescence intensity is obtained, which seriously limits the sensitivity of the sensing system
Although the centrifugation method can partially achieve the purpose of purification, but the efficiency is very low, time-consuming and labor-intensive, to obtain a better separation effect, the shortest separation time is about 1 hour
In addition, electrophoresis can be used for separation, but the resolution is low, the practical application effect is poor, and the cost is high
The above two methods have great difficulties in industrial application.

Method used

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preparation example Construction

[0050]The present invention simultaneously designs the preparation method (abbreviation preparation method) of probe described in the present invention, this preparation method first synthesizes magnetic Ni nano-particles (magnetic nano-particles; MNs), after surface modification is used as magnetic nucleus, then pass The layer-by-layer self-assembly method wraps a layer of CdTe nanoparticles outside the core to form core-shell quantum dots CdTe / MNs, which serve as energy donors for fluorescence resonance energy transfer. The CdTe / MNs prepared by this method have strong fluorescence and high quantum efficiency. Second, magnetic nano-nickel oxide (nNiO) was prepared by alcohol-water method as an energy acceptor. Then, the energy donor and the energy acceptor are respectively connected to the single-stranded DNA, and the fluorescent probe is synthesized by DNA hybridization technology.

[0051] The concrete technique of preparation method of the present invention comprises the ...

Embodiment 1

[0083] 1. DNA sequence

[0084] Detect one of the characteristic DNA sequences of plague:

[0085] Sequence 1: single-stranded DNA labeled with an amino group at the 5' end (denoted as S 1 ),

[0086] 5’-AGTAAGCAAGAGAGAGCCGGGGGG-(CH 2 ) 6 -NH 2 -3';

[0087] Sequence 2: single-stranded DNA modified with amino groups at the 3' end (with S 1 Complementary, denoted as S 2 ),

[0088] 5'-NH 2 -(CH 2 ) 6 -CCCCGGCTCTCTCTTGCTTACT-3';

[0089] Sequence 3: Target DNA (with S 1 Complementary, denoted as S 3 ),

[0090] 5'-CCCCCCGGCTCTCTCTTGCTTACT-3'.

[0091] 2. Preparation method

[0092] First, prepare CdTe / MNs-DNA (S1); the specific method is:

[0093] (1) Prepare magnetic nanoparticles MNs by alcohol-water method, the method is as follows:

[0094] Preparation volume ratio is the alcohol / water mixture solution of 0.1: 1, obtains solution A; Dissolving concentration in solution A is the Ni(NO of 0.01mol / L 3 ) 2 , to obtain solution B; take another solution A, prep...

Embodiment 2

[0107] 1. DNA sequence

[0108] Detect one of the characteristic DNA sequences of pneumococcus:

[0109] Sequence 1: single-stranded DNA labeled with an amino group at the 5' end (denoted as S 1 ),

[0110] 5'-ATTGAGATGAAGCGATATGCTGTGCCCTTAG-(CH 2 ) 6 -NH 2 -3';

[0111] Sequence 2: single-stranded DNA modified with amino groups at the 3' end (with S 1 Complementary, denoted as S 2 ),

[0112] 5'-NH 2 -(CH 2 ) 6 -TTCACAGCATATCGCTTCATCTCTCAAT-3';

[0113] Sequence 3: Target DNA (with S 1 Completely complementary, denoted as S 3 ),

[0114] 5'-CTAAGGGCACAGCATATCGCTTCATCTCTCAAT-3'.

[0115] 2. Preparation method

[0116] (1) Prepare magnetic nanoparticles MNs by alcohol-water method, the method is as follows:

[0117] The preparation volume ratio is the alcohol / water mixture solution A of 0.1:0.4, and the Ni(NO 3 ) 2 salt and obtain solution B; take another solution A and prepare a 0.2mol / L oxalic acid aqueous solution to obtain solution C. Slowly add solution...

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Abstract

The invention relates to a magnetic DNA fluorescent probe and a preparation method thereof. The probe adopts a magnetic core-shell quantum dot CdTe / MNs nano particle as an energy donor for emitting fluorescence, and the CdTe / MNs nano particle is connected with a single chain 3'-NH2-DNA to form CdTe / MNs-DNA; the probe adopts nano nickel oxide as an energy receptor for absorbing fluorescence, and the nano nickel oxide is connected with a single chain 5'-NH2-DNA to form nNiO-DNA; and the single chain 5'-NH2-DNA and the single chain 3'-NH2-DNA are complementary, and the CdTe / MNs-DNA and the nNiO-DNA are hybridized to form the probe. The preparation method comprises the following steps: 1, preparing the magnetic nano particle MNs; 2, preparing CdTe fluorescent quantum dot solution; 3, preparing CdTe / MNs primary solution; 4, preparing CdTe / MNs-DNA solution; 5, purifying the CdTe / MNs-DNA solution; 6, preparing nNiO; 7, preparing nNiO-DNA solution; 8, preparing the DNA fluorescent probe; and 9, purifying the DNA fluorescent probe.

Description

technical field [0001] The invention relates to bioengineering technology, in particular to a magnetic DNA fluorescent probe based on the principle of fluorescence resonance energy transfer and a preparation method thereof. The DNA probe can be used to detect certain small molecular living substances with characteristic DNA sequences in a liquid environment. Background technique [0002] In recent years, molecular biology has developed rapidly, new technologies have emerged, and their applications have become increasingly widespread. In particular, the potential application prospects of rapid, simple, and accurate detection of gene sequences in the fields of medical clinical laboratory science, immunology, and biology have become increasingly widespread. It has attracted widespread attention from the international scientific community. For the detection of living substances with specific DNA sequences, traditional methods mainly use radioactive labeling and polymerase chain...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/68C12N15/11C12N15/10G01N21/64
Inventor 许世超张纪梅
Owner TIANJIN POLYTECHNIC UNIV
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