sgRNA for targeted knockout of TNF[alpha] gene, porcine embryo fibroblast cell line for knocking out TNF[alpha] gene and applications of fibroblast cell line
A technology of fibroblasts and α genes, applied in the field of genetic engineering, can solve problems such as incomplete silencing, safety risks, and inability to explain gene functions well, and achieve complete knockout effects, improved efficiency and specificity, and large application The effect of research value
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Embodiment 1
[0035] Example 1 Construction and detection of CRISPR-Cas9 targeting vector targeting TNFα gene
[0036] 1. Sequence design of TNFα gene sgRNA
[0037] Download the porcine TNFα gene sequence (accession number NC_010449.5) from the NCBI website, use the website http: / / crispr.mit.edu / to design knockout target sites on the first exon of the gene, and designed a total of 10 For the target, the sgRNA with the highest set of peaks was selected according to the PCR sequencing peak map, which was the sgRNA with high editing efficiency. The final optimized sgRNA target sequence was: GCGCTCGCCAAGAAGGCCG (as shown in SEQ ID NO: 1). Dicer designs enzyme cutting sites at both ends of the sgRNA, and adds CACCG to the 5' end of the sgRNA to form Oligo1. The sequence is shown in SEQ ID NO: 2; AAAC is added to the 5' end of the reverse complementary sequence, and the 3' end Adding C constitutes Oligo2, the sequence is shown in SEQ ID NO: 3, and finally the designed sequence is sent to a bio...
Embodiment 2
[0056] Example 2 Construction and Genome Identification of TNFα Gene Knockout Porcine Embryonic Fibroblast Cell Line
[0057] 1. Screening of positive monoclonal cells
[0058] (1) When the porcine embryonic fibroblasts grew to a confluence of 70% to 90%, prepare a mixture containing 150 μL electroshock solution, 6 μg expression vector pX330-TNFα and 3 μg G418 resistance plasmid, and use the A024 program for electroporation.
[0059] (2) After 6 hours of transfection, change to a growth medium containing 10% fetal bovine serum, digest and separate the plates after 24 hours, passage the cells in the 6-well plate to 10-20 10cm culture dishes, add 600μg / mL G418 to carry out For screening, change the medium every 4 to 5 days, and change it about 2 times to obtain monoclonal cell clusters.
[0060] (3) Select monoclonal cells with regular shape and good condition, and transfer them to 48-well plates with a cloning ring to continue culturing.
[0061] (4) After the number of cells...
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