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sgRNA for targeted knockout of TNF[alpha] gene, porcine embryo fibroblast cell line for knocking out TNF[alpha] gene and applications of fibroblast cell line

A technology of fibroblasts and α genes, applied in the field of genetic engineering, can solve problems such as incomplete silencing, safety risks, and inability to explain gene functions well, and achieve complete knockout effects, improved efficiency and specificity, and large application The effect of research value

Active Publication Date: 2020-11-17
CHINA AGRI UNIV
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

At present, most of the research on TNFα gene is to use inhibitors to explore its role in humans and mice. There are few reports on the function of porcine TNFα, and it is difficult to guarantee the specificity and effectiveness of drug blocking. A good explanation of gene function also has certain safety risks
[0004] At present, methods such as inhibitors, silencing, knockdown, and interference in the prior art are not specific, incomplete or unable to silence TNFα gene expression, so it is necessary to develop a pig TNFα that can achieve complete silencing and long-term stable in vitro culture The gene-deleted cell line is expected to prepare transgenic pigs through the TNFα gene-deficient fibroblast cell line, which will provide a disease model for the study of immune and inflammatory responses, and provide a basis for further research on the regulatory role of TNFα gene in pig muscle development

Method used

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  • sgRNA for targeted knockout of TNF[alpha] gene, porcine embryo fibroblast cell line for knocking out TNF[alpha] gene and applications of fibroblast cell line
  • sgRNA for targeted knockout of TNF[alpha] gene, porcine embryo fibroblast cell line for knocking out TNF[alpha] gene and applications of fibroblast cell line
  • sgRNA for targeted knockout of TNF[alpha] gene, porcine embryo fibroblast cell line for knocking out TNF[alpha] gene and applications of fibroblast cell line

Examples

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Effect test

Embodiment 1

[0035] Example 1 Construction and detection of CRISPR-Cas9 targeting vector targeting TNFα gene

[0036] 1. Sequence design of TNFα gene sgRNA

[0037] Download the porcine TNFα gene sequence (accession number NC_010449.5) from the NCBI website, use the website http: / / crispr.mit.edu / to design knockout target sites on the first exon of the gene, and designed a total of 10 For the target, the sgRNA with the highest set of peaks was selected according to the PCR sequencing peak map, which was the sgRNA with high editing efficiency. The final optimized sgRNA target sequence was: GCGCTCGCCAAGAAGGCCG (as shown in SEQ ID NO: 1). Dicer designs enzyme cutting sites at both ends of the sgRNA, and adds CACCG to the 5' end of the sgRNA to form Oligo1. The sequence is shown in SEQ ID NO: 2; AAAC is added to the 5' end of the reverse complementary sequence, and the 3' end Adding C constitutes Oligo2, the sequence is shown in SEQ ID NO: 3, and finally the designed sequence is sent to a bio...

Embodiment 2

[0056] Example 2 Construction and Genome Identification of TNFα Gene Knockout Porcine Embryonic Fibroblast Cell Line

[0057] 1. Screening of positive monoclonal cells

[0058] (1) When the porcine embryonic fibroblasts grew to a confluence of 70% to 90%, prepare a mixture containing 150 μL electroshock solution, 6 μg expression vector pX330-TNFα and 3 μg G418 resistance plasmid, and use the A024 program for electroporation.

[0059] (2) After 6 hours of transfection, change to a growth medium containing 10% fetal bovine serum, digest and separate the plates after 24 hours, passage the cells in the 6-well plate to 10-20 10cm culture dishes, add 600μg / mL G418 to carry out For screening, change the medium every 4 to 5 days, and change it about 2 times to obtain monoclonal cell clusters.

[0060] (3) Select monoclonal cells with regular shape and good condition, and transfer them to 48-well plates with a cloning ring to continue culturing.

[0061] (4) After the number of cells...

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Abstract

The invention relates to the technical field of genetic engineering, and especially relates to a sgRNA for targeted knockout of a TNF[alpha] gene, a porcine embryo fibroblast cell line for knocking out the TNF[alpha] gene and applications of the fibroblast cell line. The target sequence of the provided sgRNA on the TNF[alpha] gene is located on the first exon and shown as SEQ ID NO: 1. After the sgRNA is constructed into the vector px330, an expression vector pX330-TNF[alpha] is taken as the targeting vector of the TNF[alpha] gene; and porcine embryo fibroblast cells are transfected so as to obtain the TNF[alpha] gene-knocked-out monoclonal cell line of porcine embryo fibroblast cells, and the obtained mutant having many different editing types can cause frameshift mutation, so that high editing efficiency can be achieved. The prepared cell line can be used as the donor of somatic cell nuclear transfer for the preparation of transgenic swine, so that the cell line has large applicationand research values.

Description

technical field [0001] The invention relates to the technical field of genetic engineering, in particular to a sgRNA targeted to knock out the TNFα gene and a porcine embryonic fibroblast cell line for knocking out the TNFα gene and applications thereof. Background technique [0002] The CRISPR-Cas system is an acquired immune system that exists in most archaea and most bacteria to resist foreign virus or DNA invasion. Type II RISPR-Cas9 system is currently the most successful transformation and the most widely used, mainly through a short RNA sequence and the DNA target sequence to form a double strand according to the principle of base complementarity, then combined with the Cas9 protein to induce the formation of a Cas9 protein at the DNA target site Double-strand break damage can introduce specific gene mutations at genomic target sites during damage repair. The CRISPR-Cas9 system has the advantages of simple design, high targeting efficiency, and the ability to form mu...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12N15/113C12N15/85C12N5/10C12N15/11C12Q1/6888C12Q1/02A01K67/027C12R1/91
CPCC12N15/113C12N15/8509C12N5/0656C07K14/525A01K67/0276G01N33/5005C12Q1/6888C12N2310/20C12N2510/00A01K2217/075A01K2227/108A01K2267/03
Inventor 张浩付玉张盼张博凌遥
Owner CHINA AGRI UNIV
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