Application of Triapine in treating African swine fever virus infection
A technology of African swine fever virus and its use, which is applied in the field of medicine, can solve the problems of research and disclosure of the therapeutic effect of Triapine on African swine fever virus, and achieve strong anti-African swine fever virus activity, high selectivity coefficient, and enhanced The effect of the treatment effect
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[0051] The preparation template described in step S101 is: the ASFV ribose nucleotide reductase small subunit full-length protein sequence template is the mouse R2 ribose nucleotide reductase with the highest matching degree with F334L retrieved in PDB bank, according to the matching length, Coincidence rate and positive rate sorting; download its PDB format and import to MOE, retain A chain and Co 2+ ;
[0052] The sequence alignment described in step S101 is: the ASFV ribonucleotide reductase small subunit gene UniProt ID:P42492 is imported into the MOE, and the structural template is used for alignment, and the sequence overlap and similarity are calculated;
[0053] The homology modeling described in step S101 is: according to the standard homology modeling program, Co. 2+ As the construction environment, block the C-terminal and N-terminal modeling, and generate the intermediate model by sampling the main chain and side chain; fine-tune it through the force field Amber12...
Embodiment 1
[0059] Drug screening method for African swine fever virus ribonucleotide reductase inhibitors
[0060] Step 1: Construction of ASFV ribonucleotide reductase small subunit model: sequence identification, template preparation, sequence alignment and homology model modeling, homology model quality evaluation.
[0061] The encoding gene of the ASFV ribonucleotide reductase small subunit is F334L (UniProt ID: P42492), which is downloaded from UniProt (http: / / www.uniprot.org) and saved in FASTA format.
[0062] The described ASFV ribose nucleotide reductase small subunit full-length protein sequence template is to retrieve the mouse R2 ribose nucleotide reductase (PDB ID: 1H0N) with the highest matching degree with F334L in PDB bank, according to the matching length ( 307 bases), coincidence rate (132 out of 307), and positive rate (184 out of 307). Download its PDB format and import it into the Molecular Operating Environment (MOE, version 2019), retaining the A-chain (R2 ribonuc...
Embodiment 2
[0070] Screening of Triapine for Inhibiting therapeutic Drugs of African Swine Fever Virus Infection
[0071] By measuring CC 50 To evaluate the toxicity of Triapine to cells: 4 x 10 5 Pig alveolar macrophages (porcine alveolar macrophages, PAM) were seeded in a 96-well plate at a density of 1 / well and incubated for 24h.
[0072] Triapine was dissolved in DMSO to form a 1 mM solution, then diluted to 0.2 mM in 1640 medium containing 10% FBS and 2% dual-antibody SP (penicillin and streptomycin) as the initial concentration, and then diluted 2-fold in sequence to 8 gradients with 3 replicate wells for each gradient.
[0073] After culturing the cells for 24 hours, discard the cell culture supernatant, add 100 μL / well of the diluted drug, put it in a cell incubator for 72 hours, and use the WST-1 cytotoxicity detection reagent (Biyuntian, product number: C0036L) to determine its cell activity. Calculate the half cytotoxic concentration CC of Triapine 50 . The results are sho...
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