Rapid diagnosis kit of enterocolitis yersinia genus gene based on loop-mediated isothermal amplification technique

A rapid diagnosis technology for Yersinia inflammatoryis, which is applied in the field of biological detection reagents, can solve the problem of no genetic rapid diagnostic kit for detecting Yersinia enterocolitica, and achieves significant color difference and high specificity , Amplify the effect of rapid

Inactive Publication Date: 2009-04-29
GUANGZHOU HUAFENG BIOTECH
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

Among them, isothermal amplification (Isothermal Amplification) nucleic acid rapid detection technology is a great progress in pathogenic nucleic acid detection technology. The established loop-mediated isothermal amplification technology (loop-mediated isothermal amplification of DNA, LAMP) has many advantages. However, there is no gene rapid diagnostic kit for detection of Y. enterocolitica using loop-mediated isothermal amplification technology.

Method used

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Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0034] The preparation of embodiment 1 kit

[0035] (1) Synthesize oligodeoxynucleic acid primers by DNA synthesizer according to the following sequence:

[0036] Outer primer F3: TGCCCAGATGGGATTAGCT;

[0037] Outer primer B3: GCCTTCTTCACACACGCG;

[0038] Inner primer FIP: GGCTGGTCATCCTCTCCAGACCAttttAGTAGGTGG

[0039] GGTAATGGCTC;

[0040] Internal primer BIP: AGACACGGTCCAGACTCCTACGttttATGGCTGCA

[0041] TCAGGCTTG;

[0042](2) Purchase DNA polymerase: Bst DNA polymerase (large fragment) and place it in a container.

[0043] (3) Preparation of reaction solution: The formula of the reaction solution contains 2mmol dNTP, 25mmol Tris-Cl, 12.5mmol potassium chloride, 12.5mmol ammonium sulfate, 10mmol magnesium sulfate, 1.25ml TritonX-100, 1mol betaine, 2 mol each of primers FIP / BIP and 0.25 mol each of outer primers F3 / B3 were prepared and placed in containers.

[0044] (4) Preparation of sample pretreatment solution: the formula of sample pretreatment solution was prepared ...

Embodiment 2

[0055] The preparation of embodiment 2 kit

[0056] The formula of the reaction solution is: each 1L reaction solution contains 1.6mmol dNTP, 20mmol Tris-HCl, 10mmol potassium chloride, 10mmol ammonium sulfate, 8mmol magnesium sulfate, 1ml TritonX-100, 0.8mol betaine, internal primer FIP / BIP each 1.6 mol and 0.2mol each of outer primer F3 / B3;

[0057] The formula of the sample pretreatment solution is: every 1L of the sample pretreatment solution contains 10mmol of Tris-HCl with pH8.0, 1mmol of EDTA and 10ml of Triton X-100.

[0058] The chromogenic solution is EvaGreen.

[0059] Others are the same as embodiment 1.

Embodiment 3

[0060] Example 3 Application of the Gene Rapid Diagnostic Kit for Yersinia enterocolitica

[0061] 1. Sample processing (template DNA extraction)

[0062] (1) Take a sample of about 25 mg / ml using aseptic technique;

[0063] (2) According to the national standard GB / T4789.8-2003, carry out the enrichment treatment;

[0064] (3) Take 1ml of enrichment suspension and centrifuge at 10,000rpm for 2min to obtain bacterial sediment;

[0065] (4) Add 100 μl of sample pretreatment solution to the above-mentioned cell pellet and mix evenly, boil in boiling water for 10 minutes, immediately place on ice to cool for 10 minutes, centrifuge at 10,000 rpm for 2 minutes, and the supernatant is the sample template DNA.

[0066] 2. The reaction process of loop-mediated isothermal amplification technology

[0067] 1) Prepare a reaction system in a 200 μl reaction tube: 22 μl of reaction solution, 0.5 μl of Bst DNA polymerase (4U), and 2.5 μl of template DNA.

[0068] 2) React the prepared r...

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Abstract

The invention discloses a kit for quickly diagnosing Yersinia genes of enterocolitis and a detection method thereof. The kit consists of two pairs of primers, DNA polymerase, a stabilizing solution, a reaction liquid, a sample pre-treatment fluid, a colored solution and a positive control solution, wherein the seven solutions are placed in a container respectively. The kit for quickly diagnosing the genes applies six segments and four primers, and can judge whether a drone substance exists or not according to the fact whether amplification is performed, so as to have high specificity. The kit for quickly diagnosing the genes is quick and high-efficiency, has high sensitivity, can perform amplification reaction only with a constant temperature, and does not require a special reagent and special equipment, so as to have low detection cost. Moreover, the kit for quickly diagnosing the genes is simple and convenient in identification; pyrophosphate ions separated out from dNTP are combined with Mg<2+> in a reaction solution to produce by-products - magnesium pyrophosphate deposits which can be observed and identified by naked eyes; and the color development difference is more obvious and reliable due to negative and positive results after addition of the colored solution.

Description

technical field [0001] The invention relates to a biological detection reagent, in particular to a rapid diagnosis kit and a detection method for the Yersinia enterocolitica gene. Background technique [0002] At present, there are many detection methods for Y. enterocolitica, ranging from the national standard (GB / T4789.8-2003) based on the isolation and identification of pathogenic microorganisms, morphological identification and automatic biochemical identification, to the immunology of specific proteins. Detection technology, nucleic acid probe, polymerase chain reaction (PCR) technology and other molecular biology detection methods [Food Safety Testing and Modern Biotechnology, Chemical Industry Press, 2004]. Among them, the detection of pathogenic nucleic acids has greatly improved in terms of rapidity, safety, accuracy and sensitivity. These new technologies try to break through the traditional microbiological detection modes such as morphology and biochemical reactio...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/68C12Q1/04
Inventor 曹以诚李志勇陈洵杜正平谭惠媚凌莉
Owner GUANGZHOU HUAFENG BIOTECH
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