Brassica napus constitutive promoter pbnac05g31880d and its application
A promoter and constitutive technology, applied in the field of plant genetic engineering and biology, can solve problems such as unsuitable production practice, unfavorable normal plant growth, harmful ecological environment, etc., and achieve good application potential
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Embodiment 1
[0033] Embodiment 1: The primer sequence design of rapeseed promoter pBnaC05g31880D:
[0034] According to the BnaC05g31880D gene (Sequence ID: GCF_000686985.2) upstream gene spacer sequence 1525bp obtained by rapeseed genome sequencing, a pair of primers were designed for PCR amplification, and the 5' upstream promoter sequence of rapeseed BnaC05g31880D was amplified, and the primers used were pBnaC05g31880D- F: 5′-GAGATCTACAGCGCTAAGCTTtatcagacatggagaagaac-3′ and pBnaC05g31880D-R: 5′-GGACTGACCACCCGGGGATCCaaagaactgttgttttgctc-3′. In the primer pBnaC05g31880D-F, the sequence GAGATCTACAGCGCT is the upstream sequence of the fusion site of the vector DX2181, and the sequence AAGCTT is the restriction site of Hind III; in the primer pBnaC05g31880D-R, the sequence GGACTGACCACCCGG is the downstream sequence of the fusion site of the vector DX2181, and the sequence is GGATCC Restriction site for BamH I.
Embodiment 2
[0035] Example 2: Preparation of rapeseed promoter pBnaC05g31880D:
[0036] The rape used in the present invention is brassica napus L. (Brassica napus L.) (provided by the Institute of Oil Crops, Chinese Academy of Agricultural Sciences, the same below), and the rape is sown in the field and managed in the normal field. Genomic DNA of rapeseed leaves was extracted by CTAB method, and polymerase chain reaction PCR (Polymerase chainreaction) was carried out using the extracted whole genome DNA of rapeseed as a template. PCR system: 2×Mix buffer 25 μL, pBnaC05g31880D-F: 1 μL, pBnaC05g31880D-R: 1 μL, DNA 1 μL, ddH 2 O 22 μL. The PCR program was: 94°C for 5 min; 35 cycles of 94°C for 30 s, 56°C for 30 s, and 72°C for 1 min; 72°C for 10 min; 4°C∞. The PCR product size is 990bp (see figure 1 ), identified by 1.0% agarose gel electrophoresis, purified and recovered, and tested for concentration according to the instructions of the kit.
[0037] The DX2181G vector plasmid was comp...
Embodiment 3
[0038] Example 3: Sequence Analysis and Function Prediction of Rapeseed Promoter pBnaC05g31880D:
[0039] The pBnaC05g31880D sequence obtained by cloning and sequencing was used in PlantCARE (Lescot M, Déhais P, Thijs G, et al. PlantCARE, a database of plantcis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences [J]. Nucleic acids research, 2002, 30 (1): 325-327. http: / / bioinformatics.psb.ugent.be / webtools / plantcare / html / ) online predictive analysis of functional components. The results show that, as shown in Table 1 and figure 2 As shown, pBnaC05g31880D contains the core elements TATAbox and CAAT box necessary for eukaryotic promoters. Further analysis of the promoter sequence found that, in addition to the necessary core elements, there are a variety of promoter functional elements in the sequence of pBnaC05g31880D: ARE: cis-acting element involved in light responsiveness, light cis-acting element involved in light responsiveness; ...
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