Gene chip and kit for detecting Newcastle disease virus, avian infectious bronchitis virus and avian infectious laryngotracheitis virus
A technology for chicken Newcastle disease virus and laryngotracheitis virus, which is applied in the field of gene chips and kits for detecting chicken Newcastle disease virus, chicken infectious bronchitis virus and chicken infectious laryngotracheitis virus, can solve the problem of no chip specificity and sensitivity test, Can not explain the problem of specific and sensitive detection at the same time, to achieve the effect of good application prospects, fast detection, and short time-consuming
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Embodiment 1
[0036] Example 1 Preparation of the gene chip of the present invention
[0037] 1. Strains
[0038] ILTV standard strain, NDV LaSota strain, IBV H120 strain.
[0039] 2. Experimental method
[0040] 2.1 Preparation of PCR primers and detection probes
[0041] (1) Design of pathogen-specific probes: by comparing and analyzing the nucleic acid sequences of chicken Newcastle disease virus, chicken infectious bronchitis virus, and chicken infectious laryngotracheitis virus included in GenBnak, a conserved region sequence was selected: NDV-F / HN, IBV-IBM / IBN, ILTV-TK / gB. Design and detect multiple pairs of probes for conserved sequences, and select the probe sequences with strong specificity.
[0042] (2) Design of specific primers for probe sequences: specific primers were designed for the above conserved probe sequences using bioinformatics software DNAman, Primer5.0, etc. Specific primers were synthesized by Shanghai Bioengineering Company.
[0043] (3) Probe preparation: ...
Embodiment 2
[0183] Embodiment 2 Detection method of the present invention
[0184] 1. Nucleic acid extraction
[0185] Extraction of viral RNA: The kit method is used to extract viral RNA, and the test uses a small amount of virus / liquid sample RNA extraction kit. Extract RNA according to the instructions of the kit, the method is as follows:
[0186] a) Take 300 μL of the sample to be tested and place it in a centrifuge tube, add 500 μL of RV solution, shake vigorously for 2 minutes, and then let stand at room temperature for 5 minutes.
[0187] b) Add 750 μL of isopropanol and shake gently.
[0188] c) Pipette 800 μL into the adsorption column and centrifuge at 12000 rpm for 30 s at 4°C.
[0189] d) Discard the liquid in the collection tube, transfer the remaining lysate into an adsorption column, and centrifuge at 12000r for 30s at 4°C.
[0190] e) Add 500 μL RP solution after discarding the collected solution, and centrifuge at 12000 rpm for 30 seconds at 4°C to remove protein.
[...
Embodiment 3
[0224] Example 3 Effect of colloidal gold on gene chip hybridization efficiency
[0225] 1. Preparation of colloidal gold
[0226] Prepare 1% HAuCl4, 1% trisodium citrate solution. Dissolve 1.0g of HAuCl4 powder in a clean beaker filled with 100mL of sterilized ultrapure water to prepare 1% HAuCl4, and store it in a brown bottle at 4°C in the dark for future use.
[0227] Take 200mL sterilized ultrapure water and 2mL1% HAuCl4 and mix them in a 500ml large beaker, then measure 20mL and divide them into 10 50mL small beakers numbered 1-10, and use a heating magnetic stirrer to mix the divided colloidal gold solutions in turn Heat for 5 minutes, and quickly add 1% trisodium citrate solution, the addition amount is 0.1mL, 0.2mL, 0.24mL, 0.28mL, 0.32mL, 0.36mL, 0.4mL, 0.6mL, 1.0mL, 1.2mL. When the color changes rapidly from light yellow to black and then to red, continue to stir for another 10 minutes to stop, wait for the solution to cool to room temperature, and filter through ...
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