Application of amino acid molecular combination as stomach cancer marker
An amino acid and molecular technology, applied in material separation, analytical materials, measuring devices, etc., can solve the problems of difficult unification of sensitivity and specificity, and achieve the effect of simple operation, good clinical application value, and less time-consuming
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Embodiment 1
[0032] Example 1: Apparatus, reagents, sample preparation and pretreatment.
[0033] Reagents and instruments: L-2-chlorophenylalanine, ethyl chloroformate, pyridine, absolute ethanol, sodium hydroxide, chloroform, anhydrous sodium sulfate, alanine (Alanine, Ala), glycine (Glycine, Gly ), valine (Valine, Val), serine (Serine, Ser), isoleucine (Iso), threonine (Threonine, Thr), proline (Proline, Pro), methionine (Methionine, Met), Tyrosine (Tyrosine, Tyr), Trytophan (Trytophan, Try) and other reagents are all analytical pure, produced by Shanghai Sinopharm Chemical Reagent Company. KQ-250DB CNC ultrasonic cleaner (produced by Kunshan Ultrasonic Instrument Co., Ltd.). LD5-2A desktop centrifuge (Beijing Jingli Centrifuge Co., Ltd.). The gas chromatograph mass spectrometer TurboMass (7890A GC / 5975C MS from Agilent, USA) comes with NIST2011 spectral library and chemical software workstation.
[0034] Subject's samples: 200 urine samples were randomly collected, of which 89 were healt...
Embodiment 2
[0036] Example 2: Setting of instrument scanning method.
[0037] The scanning mode is full ion scan combined with selected ion (SIM ion) monitoring scan. SIM ions are set to 44m / z for alanine, 102m / z for glycine, 144m / z for valine, 132m / z for serine, 158m / z for isoleucine, 101m / z for threonine, and 142m / z for proline , Methionine 61m / z, Tyrosine 107m / z, Tryptophan 130m / z, 2-Chlorophenylalanine 102m / z. The sample is first applied to a gas chromatography capillary column (Agilent J&WDB-5MS, 30m×0.25 mm×0.25μm). And using temperature-programmed gas chromatography technology, the starting temperature is 80°C, the temperature is increased to 140°C at a rate of 10°C / min, and then to 280°C at a rate of 4°C / min, and maintained for 2 minutes. Gradually increase the column temperature during the separation process so that all components can be eluted at their optimal temperature. The electron bombardment energy of the mass spectrometer is 70eV, the ion source temperature is 200°C, the ...
Embodiment 3
[0038] Example 3: Establishment of a standard quality spectrum and a standard curve.
[0039] Prepare 10 kinds of biomarker standard mixed solutions, dilute them into 10 concentration gradients in sequence, and pretreat them according to the method in Example 1, and inject the samples in Example 2. The results are shown in Table 1. The standard curve of each biomarker has good linearity, which serves as the basis for quantification. See the retention time of each biomarker figure 1 (The serial numbers are 1: Alanine; 2: Glycine; 3: Valine; 4: Serine; 5: Isoleucine; 6: Threonine; 7: Proline; 8: Methionine; 9: Tyrosine; 10: Tryptophan; Internal standard: 2-Chlorophenylalanine), the corresponding mass spectrum is shown in 2 as a qualitative basis.
[0040] Table 1 Each target molecule retention time (RT), standard curve linear range (Linear range) and linear fit (r 2 )
[0041]
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