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Method for purifying Cas12a protein

A protein and buffer technology, applied in the biological field, can solve the problems of reduced protein effective yield, complex operation, protein decomposition, etc., and achieve the effects of reducing protein loss, improving protein purity, and reducing purification costs.

Active Publication Date: 2022-05-13
INST OF GEOCHEM CHINESE ACADEMY OF SCI
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

However, the existing purification methods have problems such as long period, complicated operation, and may cause protein decomposition, which in turn leads to a decrease in the effective yield of protein.

Method used

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  • Method for purifying Cas12a protein
  • Method for purifying Cas12a protein
  • Method for purifying Cas12a protein

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0030] Example 1: Construction of Cas12a protein expression vector and expression of Cas12a protein

[0031] Competent cells Rosseta (DE3) are taken and melted on ice. Take 1 μL of plasmid 6His-MBP-TEV-huLbCpf1 (Addgene) which has been inserted into the Cas12a coding sequence and add it to 50 μL competent cells, ice bath for 30 min, then heat excite at 42 °C for 45 s, quickly and smoothly put back into ice for 2 min, add 700 μL of sterile medium without antibiotics, mix well, shake at 37 °C for 1 h, pipette about 50 μL of bacterial liquid and spread evenly to contain 100 mg / L ampicillin and 30 mg / L ampicillin. L-chloramphenicol in LB agar medium plates, culture at 37 °C overnight. Colonies were picked and transferred to media containing 100 mg / L ampicillin and 30 mg / L chloramphenicol for overnight incubation.

[0032] Take 25 mL of saturated bacterial solution and add to 1 L containing 100 mg / L ampicillin and 30 mg / L chloramphenicol and 0.2% glucose medium, culture at 37 °C to an ...

Embodiment 2

[0033] Example 2: Extraction of Cas12a protein

[0034] Thaw the bacterial bodies on ice, resuspend the bacterial bodies according to the 1:4-5 volume of lysis buffer (50 mM Tris-HCl, pH = 8.0, 20 mM imidazole, 300 mM NaCl, 0.5 mM TCEP, 0.25 mg / ml lysozyme, 1:100 protease inhibitor), and then sonically broken under ice water bath conditions, ultrasound amplitude 40, total working time of 12 min. After sonication, centrifuge 40,000 g at high speed for 1.5 h, aspirate the supernatant, and retain a small amount of samples for subsequent protein electrophoresis. The supernatant is used for the purification experiment below.

Embodiment 3

[0035] Example 3: Purification of Cas12a protein using two nickel columns and heparin columns

[0036] The following buffers were used during purification:

[0037]Buffer A (50 mM Tris-HCl, pH = 8.0, 20 mM imidazole, 300 mM NaCl, 0.5 mM TCEP);

[0038] Buffer B (50 mM Tris-HCl, pH = 8.0, 300 mM imidazole, 300 mM NaCl, 0.5 mM TCEP);

[0039] Buffer C (20 mM HEPES, 0.5 mM TCEP, 100 mM NaCl);

[0040] Buffer D (2 M NaCl, 20 mM HEPES, 0.5 mM TCEP, pH =8);

[0041] Buffer E (20 mM Tris-HCl, pH 7.5, 200 mM NaCl, 10% (v / v) glycerol).

[0042] The specific purification steps are as follows:

[0043] (1) The nickel column is crude and pure

[0044] First use peristaltic pump water to wash 5 column volumes, and then use buffer A to balance Hisrap HP 5 column volumes, and then use peristaltic pump to load the supernatant obtained in Example 2, the loading amount is about 100 ~ 150mL, and retain the flow through for electrophoresis, after the completion of the sample, first wash 5 to 10 colu...

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Abstract

The invention discloses a method for purifying a Cas12a protein, which comprises the following steps: expressing the Cas12a protein with a His tag through bacteria to obtain a supernatant containing the Cas12a protein; and purifying the supernatant by using a first nickel column, a second nickel column and a heparin column to obtain the purified Cas12a protein.

Description

Technical field [0001] The present invention relates to the field of biotechnology, specifically to a method of rapid purification of Cas12a protein. Background [0002] The CRSPR-Cas12a system is a new RNA-guided endonuclease for use in the field of genome editing. Compared with the Cas9 system, Cas12a only needs crRNA to recognize and cut the target DNA, and does not require the participation of traceRNA, and the system is simpler. The protospacer adjacent motif (PAM) sequence recognized by Cas12a is a thymic pyrimidine (T) sequence, which can extend the editing range of CRISPR. In addition, Cas12a cuts the target DNA to produce sticky ends, which is more conducive to the insertion of the gene of interest. The study also found that Cas12a had a lower off-target rate than Cas9 under the premise of similar editing efficiency. Therefore, Cas12a is widely used in gene editing. [0003] In order to prepare Cas12a proteins that meet the desired purity, it is often necessary to extra...

Claims

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Application Information

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IPC IPC(8): C12N9/22
CPCC12N9/22
Inventor 曹昊睿张华徐鹏奇冉芳汤琳晏智钟理凯文·托马斯
Owner INST OF GEOCHEM CHINESE ACADEMY OF SCI