Prevotella ruminicola xylose isomerase and co-expression with xylulokinase in yeast for xylose fermentation

a technology of xylose and isomerase, which is applied in the field of xylose isomerase enzyme and recombinant yeasts, can solve the problems of inability to grow anaerobically on xylose, low tolerance to acetic acid and other inhibitory chemicals common to biomass hydrolysates, and achieves increased activity and affinity for xylose. , the effect of increasing the activity and affinity

Active Publication Date: 2014-06-10
US SEC AGRI
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

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Benefits of technology

[0011]In accordance with this discovery, it is an object of this invention to provide a novel xylose isomerase exhibiting increased activity and affinity for xylose.
[

Problems solved by technology

Despite a growing commitment by industry to move towards these more challenging feedstocks, technical barriers still remain unsolved.
While some of these are being pursued for commercialization, they have several defects, including the inability to grow anaerobically on xylose, low tolerance to acetic acid and other inhibitory chemicals common to biomass hydrolysates, and generally low productivity and yields compared to glucose-fermenting Saccharomyces cerevisiae.
Naturally xylose-fermenting yeasts convert xylose into xylitol using xylose r

Method used

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  • Prevotella ruminicola xylose isomerase and co-expression with xylulokinase in yeast for xylose fermentation
  • Prevotella ruminicola xylose isomerase and co-expression with xylulokinase in yeast for xylose fermentation
  • Prevotella ruminicola xylose isomerase and co-expression with xylulokinase in yeast for xylose fermentation

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example 1

Methods

Strains, Media, and General Methods

[0068]Escherichia coli strain NEB10b (New England Biolabs (NEB); Ipswich, Mass., USA) was used for routine maintenance and preparation of plasmids and were grown in LB medium (Sambrook and Russell, 2001, Molecular Cloning: A Laboratory Manual, 3rd edn., Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.). DNA was transformed into yeast cells using a standard lithium acetate method (Gietz and Woods, 2002, Methods Enzymol., 350:87-96). Synthetic complete (SC) medium consisted of 6.7 g / l Difco yeast nitrogen base (YNB) (United States Biological; Marblehead, Mass., USA), and was supplemented with amino acids as necessary (Amberg et al., Methods in Yeast Genetics: A Cold Spring Harbor Laboratory Course Manual, 2005 edn., Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.). YP medium (10 g / l yeast extract, 20 g / l bacto-peptone) was autoclaved without carbohydrate. Sterile glucose or xylose was added separately.

Cloning of the ...

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Abstract

A xylose isomerase (XI) enzyme which exhibits increased activity and affinity for xylose is produced by strain TC2-24 of the rumen bacterium, Prevotella ruminicola. The gene encoding this enzyme may be used to produce improved recombinant yeast capable of utilizing xylose. The recombinant yeast are preferably transformed with heterologous polynucleotide sequences coding both the P. ruminicola XI, and the xylulokinase (XKS) of a Prevotella species. Yeast transformed with the polynucleotide sequences coding both of these XI and XKS exhibit significantly increased xylose utilization and cell growth on a culture medium containing xylose as the sole carbon source, in comparison to yeast transformed with XKS and XI from other sources.

Description

BACKGROUND OF THE INVENTION[0001]1. Field of the Invention[0002]The invention is drawn to a novel xylose isomerase enzyme and recombinant yeasts which are able to utilize xylose.[0003]2. Description of the Prior Art[0004]Over 95% of U.S. fuel ethanol is produced using corn. Eventually, it is envisioned that annual corn ethanol production can expand to 12-15 billion gallons, consuming 31% or more of the corn harvest. For this reason, commercializing lignocellulose as a feedstock for further ethanol production has been made a national priority. Despite a growing commitment by industry to move towards these more challenging feedstocks, technical barriers still remain unsolved. One critical need is for more robust microbial strains capable of fermenting the more diverse mixture of neutral sugars released by hydrolysis of lignocellulose. Plant cell wall lignocellulose contains, in order of relative abundance, glucose, xylose, arabinose, galactose, and miscellaneous other sugars. While Sa...

Claims

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Application Information

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IPC IPC(8): C12N9/92
CPCC12N9/92C12Y503/01005
Inventor HECTOR, RONALD E.DIEN, BRUCE S.COTTA, MICHAEL A.
Owner US SEC AGRI
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