Kit for synchronously detecting fifteen hemorrhagic fever pathogens and detection method of kit

A simultaneous detection and pathogen technology, applied in the direction of microbe-based methods, biochemical equipment and methods, microbiological measurement/testing, etc., can solve problems such as inability to diagnose, high technical cost, and high cost, and achieve good sensitivity and specificity , avoid the effect of low specificity and save production cost

Active Publication Date: 2013-05-01
NINGBO HEALTH GENE TECHNOLOGIES CO LTD
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

Disadvantages: initial judgment, can not be diagnosed
However, there are the following disadvantages: 1) False positives are prone to occur: due to the operation of washing and antigen coating, or cross-reaction due to similar antigenic surface determinants, false positives are prone to occur; 2) Time-consuming and labor-intensive: making antibodies is very expensive Time-consuming and labor-intensive work; 3) Uncertain sensitivity: the sensitivity of the experiment depends on the quality of the antibody, and the quality of each antibody is different, and the quality is difficult to control; 4) Unable to detect multivariate pathogens
Disadvantages: 1) Long time-consuming: generally 3-5 days or longer; 2) Low diagnostic efficiency: only a single bacterium can be purely cultured; for some pathogens with variable phenotypic characteristics, it is difficult to distinguish with morphological experience; in addition, due to Abuse of antibiotics, the growth of bacteria is inhibited during the detection process, resulting in false negative results; 3) Huge workload: Since every bacteria in each sampling sample must be tested, the workload is very huge, especially for some cultures. Bacteria with strict environmental requirements will increase the workload and difficulty of detection
However, there are also the following disadvantages: 1) Low throughput: only one pathogenic component can be detected at a time. If multiple pathogenic bacteria need to be detected, multiple PCR instruments are required to work at the same time, with low efficiency and long cycle, which will pollute large quantities of multiple pathogens. 2) The cost is relatively high: because only one pathogen can be detected at a time, when a sample needs to detect multiple pathogens at the same time, it must be tested one by one, and the cost is relatively high
Advantages: 1) High-throughput parallel detection: When a sample needs to detect multiple pathogenic bacteria at the same time, all the results can be obtained in one experiment; 2) Simple and fast operation: the whole detection can basically produce results in 4-8 hours; but There are also the following disadvantages: 1) The technology is expensive and complicated: each sample requires a chip, and the cost is more than ¥1000 / sample, which is not conducive to large-scale promotion; 2) The synthesis and immobilization of probes are more complicated, especially the production of high-density Probe array is the main rate-limiting step; 3) It cannot be accurately quantified and the repeatability is poor; 4) The sensitivity is low: the chip method requires a large amount of nucleic acid, and generally requires multiple PCR amplification first. Dimers, hairpin structures, or different Tm values ​​lead to different amplified target fragment efficiencies, which in turn affect detection sensitivity; 5) Due to the variety of chips, it is difficult to formulate a unified quality control standard
[0016] At present, there are no relevant research reports on the simultaneous detection of fifteen hemorrhagic fever pathogens and their detection methods based on the GeXP multiple gene expression genetic analysis system at home and abroad

Method used

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  • Kit for synchronously detecting fifteen hemorrhagic fever pathogens and detection method of kit
  • Kit for synchronously detecting fifteen hemorrhagic fever pathogens and detection method of kit
  • Kit for synchronously detecting fifteen hemorrhagic fever pathogens and detection method of kit

Examples

Experimental program
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Effect test

specific Embodiment 1

[0037] The present invention is a kit for simultaneous detection of fifteen kinds of hemorrhagic fever pathogens, including DEPC water (RNase / DNase-free ultrapure water), 5×RT buffer, reverse transcription primer (RT primer mix), RT enzyme ( Full name Reverse transcriptase), X solution, 10×PCR buffer, PCR primer (PCR Primer Mix), 25mM magnesium chloride solution, DNA polymerase (Taq DNA Polymerase), positive control (obtained from each target pathogen clone, including Target fragment plasmid, used for quality control of the entire reaction system), 5×RT buffer, 10×PCR buffer, 25mM magnesium chloride solution, and DNA polymerase were ordered from sigma company.

[0038] The above-mentioned reverse transcription primers include the RT amplification primers of nine kinds of hemorrhagic fever pathogens in the following table 1 and the RT amplification primers of human RNA internal reference, and the above-mentioned PCR primers include the forward and reverse PCR amplifications of t...

specific Embodiment 2

[0048] The invention is a method for synchronously detecting fifteen kinds of hemorrhagic fever pathogens, and the detected hemorrhagic fever pathogens are Hantaan virus, dengue virus, Xinjiang hemorrhagic fever virus, Ebola virus, New Bunia disease, Chikungunya virus , West Nile virus, yellow fever virus, Marburg virus, Yersinia pestis, Neisseria meningitidis, Streptococcus suis, Streptococcus pyogenes, Leptospira, Rickettsia (tsutsugamushi), etc. (see Table 1) , collect patient samples (blood, throat swabs, etc.) to extract nucleic acid, use patient nucleic acid as a template to perform reverse transcription and PCR reactions, and finally separate samples by capillary electrophoresis. The specific steps are as follows:

[0049] 1. Production of kits for the simultaneous detection of fifteen hemorrhagic fever pathogens based on the GeXP multiple gene expression genetic analysis system. The components included in the kit are the same as those in Example 1 above;

[0050] 2. Co...

specific Embodiment 3

[0076] Detection Kit Sensitivity and Specificity Analysis

[0077] Sensitivity analysis: After diluting the positive control according to a certain copy number ratio, PCR amplification and capillary electrophoresis detection until no signal is detected, the copy number is the lowest detection line, which is the sensitivity of the kit. The highest sensitivity can detect 40 copies.

[0078] Specificity analysis: Single-plex PCR amplification is detected as a single peak of the target fragment size by capillary electrophoresis.

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Abstract

The invention discloses a kit for synchronously detecting fifteen hemorrhagic fever pathogens and a detection method of the kit. The kit comprises DEPC (diethylpyrocarbonate) water, a 5*RT (reverse transcription) buffer, a reverse transcription primer, a reverse transcriptase, an X solution, a 10*PCR (polymerase chain reaction) buffer, a PCR primer, a 25mM magnesium chloride solution, a DNA (deoxyribonucleic acid) polymerase and a positive control, and is characterized in that the reverse transcription primer comprises RT amplification primers of the nine hemorrhagic fever pathogens and a human RNA (ribonucleic acid) internal reference, and has a gene sequence shown as SEQ ID NO. 1-10 (sequence identifier number 1-10), and the PCR primer comprises forward and reverse PCR amplification primers of the rest six hemorrhagic fever pathogens, a human DNA internal reference and a reaction internal reference, and PCR amplification primers of the nine hemorrhagic fever pathogens and the human RNA internal reference, and has a gene sequence show as SEQ ID NO. 10-36. The kit and the detection method have the advantages of high specificity, sensitivity, flux and reliability, low cost, and no false negative results.

Description

technical field [0001] The invention relates to a detection kit and a detection method for hemorrhagic fever pathogens, in particular to a kit for synchronously detecting fifteen kinds of hemorrhagic fever pathogens based on a GeXP multiple gene expression genetic analysis system and a detection method thereof. Background technique [0002] Fever with hemorrhage is an important infectious disease that endangers human health. It is popular, critical, and has a high fatality rate. It is extremely harmful. Because the disease has fever symptoms, it is often misdiagnosed as upper respiratory tract infection. In addition, routine laboratory tests such as blood biochemical tests, serological tests, and virus isolation cannot quickly and accurately identify various pathogens, resulting in delays in treatment and even the spread of the epidemic. Therefore, there is an urgent need for an efficient diagnostic method for hemorrhagic fever pathogens. [0003] At present, the tradition...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/70C12Q1/68C12Q1/04C12R1/93C12R1/36C12R1/46C12R1/01
Inventor 吴勇黄迎彬南丽颜进徐冰
Owner NINGBO HEALTH GENE TECHNOLOGIES CO LTD
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