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Real-time fluorescence quantification PCR detecting kit for cow mycoplasma and special primers and TaqMan probe thereof

A technology of real-time fluorescence quantification and detection kits, which is applied in the determination/inspection of microorganisms, biochemical equipment and methods, DNA/RNA fragments, etc., and can solve the problems of difficulty in finding specific antigens, long culture cycles, and poor specificity. Achieve high accuracy, fast detection speed and high specificity

Inactive Publication Date: 2016-03-23
JINYUBAOLING BIO PHARM CO LTD +1
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

Etiological detection is mainly the isolation and culture of pathogenic microorganisms and the staining microscope examination of pathogenic microorganisms. Since Mycoplasma bovis has strict requirements on nutrients and a long culture period, it is pleomorphic under the microscope and has a low detection rate. For the clinical diagnosis of bovis mycoplasma disease, routine pathogenic detection has too many disadvantages
The most widely used immunological detection method is enzyme-linked immunosorbent assay (Enzyme-linkedimmunosorbentassay, ELISA). Most ELISA kits are coated with whole bacterial protein as antigen. The surface membrane proteins are very similar, and it is still difficult to find a highly specific antigen for differential diagnosis at this stage, and the ELISA diagnostic method coated with whole bacterial protein as an antigen is bound to have cross-reactivity, resulting in poor specificity of the method
The increasing development of molecular biology technology is of great significance for the clinical diagnosis of infectious diseases. At present, the molecular biology detection methods for Mycoplasma bovis are widely used in China, mainly including multiplex PCR (multiplexPCR), nested PCR (nestedPCR), RT- PCR (reversetranscriptasePCR) etc., and the real-time fluorescent quantitative PCR detection method of Mycoplasma bovis has not been reported yet

Method used

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  • Real-time fluorescence quantification PCR detecting kit for cow mycoplasma and special primers and TaqMan probe thereof
  • Real-time fluorescence quantification PCR detecting kit for cow mycoplasma and special primers and TaqMan probe thereof
  • Real-time fluorescence quantification PCR detecting kit for cow mycoplasma and special primers and TaqMan probe thereof

Examples

Experimental program
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Effect test

Embodiment 1

[0046] Example 1. Design of real-time fluorescent quantitative PCR primers and TaqMan probes for qualitative and quantitative detection of Mycoplasma bovis

[0047] The sequence of Mycoplasma bovis OPPD / F gene (AF130119) was retrieved from NCBI's nucleic acid database GenBank (http: / / www.ncbi.nlm.nih.gov). After alignment with DNAMan software, it was designed according to primers and TaqMan probes In principle, select the specific conservative sequence of the OPPD / F gene of Mycoplasma bovis (bases 241-398 from the 5'end) as the detection sequence, and use Primer5.0 software to design primers and TaqMan for real-time fluorescent quantitative PCR detection of Mycoplasma bovis Probe, the sequence is as follows:

[0048] Upstream primer (OF-A): 5'-AAGGAACCCCACCAGATATG-3' (SEQ ID NO: 1 in the sequence table),

[0049] Downstream primer (OF-B): 5'-TGGTGCATCAGGGTGAAGTA-3' (SEQIDNO: 2 in the sequence listing),

[0050] TaqMan probe (OF-P): FAM-5'-ACTTACCTATCGGTGACCCTTTTGC-3'-TAMRA (SEQ ID NO...

Embodiment 2

[0052] Example 2. Real-time fluorescent quantitative PCR detection of Mycoplasma bovis using the primers and TaqMan probes of the present invention

[0053] 1. Extract the genomic DNA of Mycoplasma bovis

[0054] The genomic DNA of Mycoplasma bovis (derived from a pure culture) is extracted with a bacterial genomic DNA extraction kit (purchased from Tiangen). The specific method includes the following steps:

[0055] 1. Take 1-5 mL of bacterial culture solution and centrifuge at 10,000 rpm for 1 min. Try to absorb the supernatant.

[0056] 2. Add 200μL of buffer GA to the bacterial pellet and shake until the bacterial cells are completely suspended.

[0057] 3. Add 20μL of ProteinaseK solution to the tube and mix well.

[0058] 4. Add 220 μL of buffer GB, shake for 15 sec, and place at 70°C for 10 min. The solution should be clear. Centrifuge briefly to remove water droplets on the inner wall of the cap.

[0059] 5. Add 220μL of absolute ethanol, shake and mix well for 15sec. At this time...

Embodiment 3

[0079] Example 3. Detection of the specificity of the real-time fluorescent quantitative PCR detection method for Mycoplasma bovis

[0080] Brucella, Streptococcus, Pasteurella, Bovine Infectious Rhinotracheitis Virus, Mycoplasma Ovis Pneumoniae Y98, Mycoplasma Mycoplasma Goat PG3, Foot-and-Mouth Disease Virus, Mycoplasma Mycoplasma, Mycoplasma Agalactia Microclone (The above strains are all from The Infectious Disease Control Center of the Chinese People’s Liberation Army’s Disease Control and Prevention Institute) as a template, with 10 4 The copy / μL Mycoplasma bovis cloning plasmid pMD19-T-OPPD / F standard product is used as a positive control, and sterile deionized water is used as a negative control to detect the specificity of the real-time fluorescent quantitative PCR detection method for Mycoplasma bovis of the present invention. The reaction system and reaction conditions of the real-time fluorescent quantitative PCR detection are the same as in Example 3.

[0081] Specific...

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Abstract

The invention discloses a real-time fluorescence quantification PCR detecting kit for cow mycoplasma, special primers and a TaqMan probe thereof and application of the detecting kit in detection of cow mycoplasma. The primers and the TaqMan probe for real-time fluorescence quantification PCR detecting of the cow mycoplasma are designed according to a specific conserved sequence of an OPPD / F gene of the cow mycoplasma and are used for detecting the cow mycoplasma of a sample to be detected qualitatively and quantitatively. The nucleotide sequence of the upstream primer (OF-A) is shown as SED ID NO:1 in a sequence table, the nucleotide sequence of the downstream primer (OF-B) is shown as SED ID NO:2 in the sequence table, and the nucleotide sequence of the TaqMan probe (OF-P) is shown as SEQ IDNO:3 in the sequence table. By means of the detecting kit, the special primers and the TaqMan probe thereof, the cow mycoplasma can be detected quickly, conveniently, efficiently, highly specifically and highly sensitively, and a novel technical platform is provided for detection of the cow mycoplasma.

Description

Technical field [0001] The invention belongs to the detection of bovine mycoplasma in the field of veterinary infectious diseases, and particularly relates to a real-time fluorescent quantitative PCR detection kit for detecting bovine mycoplasma pathogens, its special primers, TaqMan probes and their application in detecting bovine mycoplasma. Background technique [0002] Mycoplasma bovis (Mycoplasmabovis) belongs to the class of Lapis, Mycoplasma, Mycoplasma, and Mycoplasma. It is the smallest microorganism known to grow and reproduce independently in a cell-free medium. In 1961, American scientist Hale isolated Mycoplasma bovis from cow's milk suffering from mastitis for the first time. It was first reported in 1976 that Mycoplasma bovis was related to bovine respiratory diseases. In 2008, mycoplasma bovis, which can cause pneumonia, was isolated and identified for the first time in my country, and the pathogen of this disease was successively isolated in Hubei, Inner Mongoli...

Claims

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Application Information

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IPC IPC(8): C12Q1/68C12N15/11
CPCC12Q1/686C12Q1/689
Inventor 申之义魏学峰李建纪燕高航飞李雪峰郝雪斌杜宇荣王英刘国英
Owner JINYUBAOLING BIO PHARM CO LTD
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