Iterative gene circuit based on vibrio fischeri quorum sensing system and T7 expression system, and application of iterative gene circuit

A quorum sensing system and gene circuit technology, applied in the field of genetic engineering, can solve the problems of inability to achieve strict regulation of target genes, weak activation of quorum sensing system, and limited application of quorum sensing system, so as to save fermentation costs and reduce expression leakage. , the effect of enhancing vitality

Active Publication Date: 2020-02-04
NANJING AGRICULTURAL UNIVERSITY
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0007] In the current technology, there are reports about the luxI / luxR quorum sensing system of Vibrio fischeri, which are generally used for research on quorum sensing inhibitors, by inhibiting signal molecules Synthesis of signal molecules, promoting the degradation of signal molecules and inhibiting the combination of signal molecules and receptor proteins and other means to inhibit the quorum sensing of microorganisms, prevent and treat pathogen infection and food spoilage caused by quorum sensing, but the use of Vibrio fischeri quorum sensing system for synthetic biological The gene circuit application of scientific design and signal regulation has not been reported yet, because the quorum sensing system of Vibrio fischeri itself has a certain expression leakage, which cannot achieve strict regulation of target genes; and the quorum sensing system of Vibrio fischeri The start-up strength is weak and cannot meet the downstream complex circuit requirements, which limits the application of quorum sensing systems

Method used

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  • Iterative gene circuit based on vibrio fischeri quorum sensing system and T7 expression system, and application of iterative gene circuit
  • Iterative gene circuit based on vibrio fischeri quorum sensing system and T7 expression system, and application of iterative gene circuit
  • Iterative gene circuit based on vibrio fischeri quorum sensing system and T7 expression system, and application of iterative gene circuit

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0047] Cloning of major components of an iterative gene circuit based on Vibrio fischeri quorum sensing system and T7 expression system

[0048] 1. Strains and plasmids

[0049] Vibrio fischeri (BNCC165003) was purchased from Beina Bio, Escherichia coli (E.coli bl21(DE3)) strains, Escherichia coli (E.coli Jm109) and expression vectors pACYCDuet-1, pColADuet-1, pETDuet-1 were obtained from Novagen Company (Darmstadt, Germany), PMD19T simple vector was purchased from Takara Company, and expression vector dry powder containing green fluorescent protein gene egfp was purchased from Shuangling Biology.

[0050] 2. Enzymes and other reagents

[0051] Various antibiotics including ampicillin and chloramphenicol were purchased from Shanghai Sangong Co., Ltd. All chemical reagents were of analytical grade and purchased from Shanghai Sangong Co., Ltd. Various restriction endonucleases and DNA ligases were purchased from Thermo. 1kb DNALadder, plasmid mini-extraction kit, gel recover...

Embodiment 2

[0123] Transformation of a low-leakage quorum-sensing promoter in Vibrio fischeri

[0124] The PluxI promoter of Vibrio fischeri itself has a certain degree of leakage, and the gene cannot be strictly regulated. Therefore, it is considered to carry out directional transformation on the promoter PluxI with a full length of 215bp to reduce the leakage of the promoter, such as figure 1 The original PluxI promoter shown is highly leaky. Taking the first base of the gene sequence as No. 1, and the upstream base as No. -1, respectively design primers SEQ ID NO:11 / SEQ ID NO:15, SEQ ID NO:12 / SEQ ID NO:15, SEQ ID NO: 13 / SEQ ID NO: 15, SEQ ID NO: 14 / SEQ ID NO: 15 were amplified from -85, -114, -57, -80 to -1 base, and the lengths were respectively 87bp PluxI(1), 114bp PluxI(2), 57bp PluxI(3) and 80bp PluxI(4), verify that the LuxR binding site and its upstream sequence recognize and initiate the promoter and signal molecule-receptor protein complex Interaction between sub- and RNA pol...

Embodiment 3

[0140] Construction and fermentation of a fermentation strain that autonomously and dynamically regulates the expression of green fluorescent protein

[0141] Construction of gene circuit expression vector

[0142] The specific construction diagram is as follows image 3 shown. The PluxI(1) promoter was connected to the EcoNI and XhoI of pColADuet-1 by EcoNI and XhoI double digestion, and the NcoI / BamHI / EcoRI restriction site was added before XhoI to obtain pColA-PluxI(1) (EcoNI / XhoI) plasmid, the T7 RNA polymerase gene was connected to the NcoI / EcoRI of pColA-PluxI(1) (EcoNI / XhoI) through NcoI / EcoRI double enzyme digestion, and the plasmid pColA-PluxI(1)-T7 RNApoly (ie O-PluxI(1)-T7 RNApoly). The gene egfp was digested with NcoI / EcoRI and ligated into the NcoI / EcoRI of pETDuet-1 to obtain the plasmid E-egfp (pET-egfp).

[0143] Competent preparation of Escherichia coli

[0144] The transgenic recipient used in this example is Escherichia coli (Escherichia coli BL21), wh...

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Abstract

The invention discloses an iterative gene circuit based on a vibrio fischeri quorum sensing system and a T7 expression system. The iterative gene circuit comprises a signal molecular protein gene luxIof vibrio fischeri, a receptor protein gene luxR, a promoter sequence PluxI(1) for sensing a signal molecular and receptor protein complex, a T7 RNA polymerase gene T7 RNApoly and a green fluorescentprotein egfp for representing the circuit intensity. The gene circuit does not rely on an inducer and can utilize the T7 expression system to spontaneously and forcefully initiate target gene expression in any host bacterium; and gene elements are constructed on different expression vectors, the iterative gene circuit is constructed in engineering bacteria, the T7 expression system is utilized toamplify signals of the vibrio fischeri quorum sensing system, and the iterative gene circuit has the function of utilizing the T7 expression system to spontaneously and forcefully initiate target gene expression, and has a lower leakage ratio and higher initiating strength.

Description

technical field [0001] The invention belongs to the field of genetic engineering, and in particular relates to an iterative gene circuit based on a Vibrio fischeri quorum sensing system and a T7 expression system and an application thereof. Background technique [0002] Fermentation engineering bacteria need to synthesize a large amount of recombinant protein and build a synthetic pathway. If a large amount of recombinant protein is expressed at the starting point of culture, it will compete with cell metabolism for intracellular resources, which will bring a huge burden to the bacteria. The imbalance of metabolic network will lead to some toxic intermediates. The accumulation of products will also cause toxicity to the growth of the bacteria, making the strain unable to maintain a good growth state and affecting the yield of the final product. Therefore, the predecessors have explored a variety of operating elements to achieve the induction and regulation of genes, includin...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12N15/70C12N15/65C12N1/21C12R1/19
CPCC12N15/70C12N15/65C12N2830/002C12N2830/55
Inventor 吴俊俊周朋包美娇董明盛
Owner NANJING AGRICULTURAL UNIVERSITY
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