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Histidine-labeled fluorescent probe as well as preparation method and application thereof

A technology of fluorescent probes and fluorescent compounds, which is applied in the fields of chemistry and biology, can solve the problems of slow protein labeling, complex synthesis methods, and inapplicability, and achieve the effects of strong specificity, high sensitivity, and reduced interference

Pending Publication Date: 2022-04-12
ZHEJIANG UNIV OF TECH
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

Fluorescent probes based on single or multiple NTA (nitrilotriacetate) derivatives are commonly used, although these probes overcome the histidine tag and Ni 2+ Disadvantages of weak binding
However, due to the large molecular weight of these fluorescent probes, there are disadvantages such as high application cost, complicated synthesis methods, and slow protein labeling, which make these fluorescent probes unable to be applied to most of the existing histidine-tagged fusion protein libraries.

Method used

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  • Histidine-labeled fluorescent probe as well as preparation method and application thereof
  • Histidine-labeled fluorescent probe as well as preparation method and application thereof
  • Histidine-labeled fluorescent probe as well as preparation method and application thereof

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0032] Embodiment 1: the chemical synthesis of fluorescent probe Rho-IDA

[0033] 1) In a 50 mL reaction flask equipped with a magnetic stirrer, add 0.1 mmol of rhodamine B and 10 mL of dichloromethane, and fully dissolve.

[0034] 2) Slowly add 0.15 mmol N-hydroxysuccinimide and 0.15 mmol N, N'-dicyclohexylcarbodiimide, react at room temperature overnight, and filter to remove the precipitate.

[0035] 3) Slowly add 0.2 mmol of triethylamine and mix well.

[0036] 4) Add 0.15 mmol of iminodiacetic acid and react overnight at room temperature.

[0037] 5) Evaporate the solvent under reduced pressure, dissolve the residue with 30 mL of dichloromethane, continue to add 30 mL of saturated saline for extraction, and separate the dichloromethane layer.

[0038] 6) Filter to remove impurities, use silica gel column chromatography, the eluent is petroleum ether:ethyl acetate=5:1, and obtain rose bengal powder with a total yield of 64%.

[0039] The synthetic product obtained above...

Embodiment 2

[0040] Embodiment 2: Fluorescent performance measurement of fluorescent probe Rho-IDA-CoII

[0041] 1) The same molar concentration of Rho-IDA and CoCl 2 Equal volumes were mixed to obtain the fluorescent probe Rho-IDA-CoII;

[0042] 2) Take 200 μL of 0.1 mM fluorescent probe Rho-IDA-CoII aqueous solution into a micro-quartz cuvette, and use a UV-visible light spectrophotometer to scan the Rho-IDA-CoII sample at a full wavelength, with a wavelength range of 200 nm~ 850nm, with ultrapure water as a blank control. The results of full-wavelength scanning showed that the fluorescent probe Rho-IDA-CoII had maximum absorption peaks at two wavelengths of 550 nm and 575 nm.

[0043] 3) Transfer the fluorescent probe Rho-IDA-CoII solution sample in step 2 to a micro-fluorescent cuvette, set the excitation wavelength to 550 nm, and scan the fluorescent probe Rho-IDA-CoII in the wavelength range of 400-750 nm Fluorescence intensity within;

[0044] 4) The test results show that ( i...

Embodiment 3

[0045] Example 3: In vitro staining of histidine-tagged proteins based on fluorescent probe Rho-IDA-CoII

[0046] 1) Mix the histidine-tagged fusion protein to be detected (SEQ ID NO. 1) with electrophoresis loading buffer at a ratio of 3:1, and bathe in boiling water for 5 min;

[0047] 2) Use 4-20% gradient gel (GenScript, China) to separate the protein samples by SDS-PAGE, the electrophoresis condition is 200 V constant voltage, 40 min;

[0048] 3) After electrophoresis, carefully soak the gel in fixative solution for 1 h;

[0049]4) Rinse the gel twice with deionized water, 10 min each time, to fully remove the fixative;

[0050] 5) Transfer the gel to fluorescent staining solution and stain in the dark for 1 h;

[0051] 6) Rinse the gel twice with washing solution, 10 min each time;

[0052] 7) Use Bio-Rad CCD camera to capture fluorescent gel images;

[0053] 8) Stain the gel that has recorded the fluorescent staining results in step 7 with Coomassie Brilliant Blue, ...

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Abstract

The invention discloses a histidine-labeled fluorescent probe as well as a preparation method and application thereof. The invention discloses a histidine-labeled fluorescent compound based on a rhodamine B derivative as well as a preparation method and application of the histidine-labeled fluorescent compound. The fluorescent compound Rho-IDA can be chelated with different metal ions, and the fluorescent probe derivative Rho-IDA-CoII obtained by chelating divalent cobalt ions has the function of specifically labeling histidine tag fusion protein. The fluorescent probe has the advantages that the synthesis method is simple and convenient, the molecular weight is small, and excitation and emission wavelengths are located in a near-infrared light region. When the fluorescent probe is applied to biological imaging, interference of fluorescent impurities in a background environment can be reduced; meanwhile, the histidine tag fusion protein in the gel can be rapidly and specifically labeled and dyed, and a reliable research tool is provided for related biochemical research.

Description

technical field [0001] The invention relates to the fields of chemistry and biotechnology, in particular to a histidine-tagged fluorescent compound based on rhodamine B derivatives and a preparation method and application thereof. Background technique [0002] Biochemical labeling of proteins can elucidate protein function, localization, and dynamics. Small molecule-based fluorescent labeling of recombinant proteins holds particular promise as an alternative to fluorescent protein fusion technology without harmful interference with protein function. A typical technology is fluorescent imaging based on small molecule labeling. This technology is to design and synthesize a fluorescent probe that can bind to a specific short peptide, and to achieve protein labeling of the small molecule fluorescent probe by fusing the specific short peptide to the target protein. In recent decades, research on protein labeling based on small molecule probes has made tremendous progress. Among...

Claims

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Application Information

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IPC IPC(8): C07D311/82C09K11/06G01N21/64
Inventor 柳志强沈骥冬蔡雪金利群郑裕国
Owner ZHEJIANG UNIV OF TECH
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