The invention provides a
calcium imaging neural
signal extraction method and product based on self-supervised pre-training, and relates to the technical field of
artificial intelligence. Based on a pre-training
data set containing a large amount of unlabeled two-
photon calcium fluorescence imaging data, a pre-training decoding network and a corresponding pre-training task are self-supervised, and a pre-trained space-time coding network is trained by taking minimization of a pre-training
loss function as a target; the method comprises the following steps of: firstly, establishing an
encoder and decoder network, establishing fine-tuning data with accurate space-time marked
neuron calcium signal positions through
simulation, simultaneously performing fine-tuning on the
encoder and decoder network by taking minimization of a fine-tuning
loss function as a target, and checking the
algorithm extraction precision based on various actual
imaging data to obtain a calcium
imaging signal extraction algorithm network with strong generalization performance. Therefore, a calcium
signal extraction model which can be generalized in various imaging conditions and model biological brain regions can be obtained through training without manual labeling, a high-accuracy neural
signal extraction result is obtained, the application difficulty that a
deep learning model lacks data generalization ability is overcome, and the accuracy of a neural
signal extraction result is improved.
Calcium imaging
neural activity analysis based on self-supervised pre-training and wide in application is achieved.