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Optimized gene of ietalurus punetaus LEAP-2 mature peptide and preparation method of recombinant protein of optimized gene

A channel catfish and LEAP-2 technology, applied in the field of genetic engineering, can solve the problems of reduced product activity, no optimization, unknown expression level, etc., to achieve the effects of increasing yield, saving costs, and facilitating later operations

Inactive Publication Date: 2016-12-14
SHANGHAI OCEAN UNIV +1
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  • Summary
  • Abstract
  • Description
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  • Application Information

AI Technical Summary

Problems solved by technology

The expression of the latter grouper antimicrobial peptide LEAP-2 in Pichia pastoris has the following disadvantages: first, it adopts a precursor peptide gene that theoretically does not have direct biological activity for recombinant expression, and the obtained The activity of the target protein will be affected in theory; the second is that the gene used is a natural cDNA, which has not been optimized according to the codon preference of Pichia pastoris, and the expressed target protein has not been purified, resulting in an unknown expression level; When constructing the eukaryotic expression vector, EcoRI and XbaI restriction sites were used, resulting in the resulting recombinant protein carrying two additional amino acid residues (YV) at the N-terminus, which are important for its activity It is unknown what kind of impact it will have, so there is a possibility of reducing the activity of the product; Fourth, its product is only identified by SDS-PAGE and Western-blot analysis, and does not provide mass spectrometry detection data (generally confirming whether the target protein is correctly expressed requires After detection and analysis by mass spectrometry, the target protein fragment is compared with the theoretical amino acid sequence of the target protein to determine whether the product is a recombinant target protein), so it cannot be completely confirmed that the product is a recombinant target protein
It is worth noting that the culture medium used in the above-mentioned patent of "Clanted grouper antimicrobial peptide LEAP-2 gene, carrier, recombinant strain and protein and its application" is also a traditional culture medium for laboratories containing yeast extract and peptone. However, the cost of this medium is high, and the post-treatment of the fermentation liquid is troublesome. Generally, it is not used when fermenting with a fermenter in production, so it does not have practical production and application value.

Method used

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  • Optimized gene of ietalurus punetaus LEAP-2 mature peptide and preparation method of recombinant protein of optimized gene
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  • Optimized gene of ietalurus punetaus LEAP-2 mature peptide and preparation method of recombinant protein of optimized gene

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Experimental program
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Effect test

Embodiment 1

[0048] Recombinant expression of unoptimized native cDNA (SEQ ID NO:1) of channel catfish LEAP-2 mature peptide in Pichia pastoris GS115

[0049] 1.1 Addition of restriction sites for channel catfish LEAP-2 mature peptide gene

[0050] Design 3 primers containing EcoRI, NotI restriction site and 6×His tag respectively (see Table 1). For the first PCR, the prokaryotic expression vector "pET-32a-mLEAP2" of the existing channel catfish LEAP-2 mature peptide gene "mLEAP2" was used as a template, and LF and LR1 were used as primers. The reaction system and conditions were as follows:

[0051] "pET-32a-mLEAP2" 2.5 μL, forward and reverse primers 4.0 μL (10 μmol / L), dNTP (10 mmol / L) 8.0 μL, PCR buffer 10 μL, Taq DNA polymerase (Takara, Otsu, Japan) 1 μL, with Sterile water was adjusted to 100 μL; 30 cycles of pre-denaturation at 94°C for 3 min, denaturation at 94°C for 30 s, annealing at 54.6°C for 30 s, extension at 72°C for 1 min, and a final extension at 72°C for 5 min. Using th...

Embodiment 2

[0065] Recombinant expression and purification of channel catfish LEAP-2 mature peptide codon-optimized cDNA in Pichia pastoris X-33

[0066]2.1 Medium formula:

[0067] (BMG medium: YNB 13.4g / L, biotin 4×10 -4 g / L, potassium phosphate buffer 0.1mol / L pH6.0, glycerol 10ml / L; BMMS medium: YNB 13.4g / L, biotin 4×10 -4 g / L, methanol 7.5mL / L, potassium phosphate buffer 0.1mol / L pH6.0, sorbitol 18.2g / L).

[0068] 2.2 Optimized synthesis of cDNA of channel catfish LEAP-2 mature peptide and addition of enzyme cutting sites

[0069] Refer to Gao Bei et al. (Gao Bei, Tao Yan. Channel catfish (Ictalurus punctatus) LEAP2 mature peptide fusion expression in Escherichia coli [J]. Biotechnology Bulletin, 2014 (2): 130-135.) published channel catfish LEAP2 The cDNA sequence of the mature peptide, according to the codon preference of Pichia pastoris to the original ATG, ACA, CCC, CTT, TGG, AGA, ATC, ATG, GGT, ACT, AAA, CCC, CAT, GGG, GCA, TAC, TGT, CAG, AAT, AAC, TAT, GAG, TGT, TCC, ACG, G...

Embodiment 3

[0079] Antibacterial activity of recombinant channel catfish LEAP-2 mature peptide expressed by codon-optimized gene expression by colony counting

[0080] The selected Gram-positive bacteria were Staphylococcus aureus and Bacillus subtilis, and the Gram-negative bacteria were Escherichia coli ATCC25922. Cultivate the above-mentioned bacteria overnight in LB liquid medium, and then use fresh LB liquid medium to reduce the OD of the bacteria to 600 Adjust to 1.0, incubate at 37°C for 2 hours according to the ratio of bacterial liquid to culture supernatant 1:100, and treat the culture supernatant of the yeast transformant containing the pPICZαA empty plasmid and the bacteria in the same way as a negative control; Take 30 μL and spread it on LB solid medium, incubate at 37°C for 8 hours, and observe the number of colonies. Such as Figure 11 As shown, the culture supernatant containing the recombinant channel catfish LEAP-2 mature peptide has antibacterial activity against Sta...

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Abstract

The invention discloses an optimized gene of ietalurus punetaus LEAP-2 mature peptide and a preparation method of recombinant protein of the optimized gene, and further provides a recombinant expression carrier and yeast host cell containing the optimized gene, application of the optimized gene to producing the ietalurus punetaus LEAP-2 mature peptide, and application of the recombinant protein to preparing antibacterial medicines. On the premise of not changing the amino acid sequence of the ietalurus punetaus LEAP-2 mature peptide, the amino acid sequence of the gene of the ietalurus punetaus LEAP-2 mature peptide is optimized according to pichia pastoris preferred codons, and the optimized sequence is SEQ ID NO:2. By expressing the optimized gene in a pichia pastoris host cell, the recombinant ietalurus punetaus LEAP-2 mature peptide is prepared. By means of the preparation method, the LEAP-2 mature peptide can be efficiently prepared, the applied culture conditions are simple, cost is low, and the obtained LEAP-2 mature peptide is good in antibacterial effect.

Description

technical field [0001] The present invention relates to a codon-optimized gene, in particular to an optimized gene after transformation of the channel catfish LEAP-2 mature peptide gene according to the preferred codon of Pichia pastoris, and a method for preparing a recombinant protein coded by it, which belongs to genetic engineering field. Background technique [0002] Looking at the domestic aquaculture industry, seawater and freshwater aquaculture areas are mostly distributed in the waters near coastal harbors and estuaries, and these waters are also the main receiving places for coastal land-based pollutants and marine sewage. According to statistics, the amount of waste water directly discharged into the sea in my country is as high as 8 billion tons every year. Agricultural sewage rich in nutrients, pathogenic microorganisms and organic pesticides also flows into coastal water bodies along with the surface, resulting in deterioration of water quality. Such aquacultu...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12N15/12C12N15/81C07K14/46A61K38/17A61P31/04C12R1/84
CPCA61K38/00C07K14/461Y02A50/30
Inventor 陶妍孙立人沈彦萍
Owner SHANGHAI OCEAN UNIV
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