Primer, probe composition and kit for detecting exon copy number variation of human DMD gene
A copy number variation and exon technology, used in biochemical equipment and methods, recombinant DNA technology, and microbial assay/inspection, etc., can solve problems such as increased fragility, decreased stability, and rupture of muscle cell membranes. The effect of simple operation, low requirements and low operator skill requirements
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[0031] The real-time fluorescent PCR method of the present embodiment detects the test kit (100 reactions / box) of exon 53 copy number variation of human DMD gene and comprises components, as shown in table 1:
[0032] Table 1. Kit components
[0033]
[0034] The specific primers and probe nucleotide sequences of the No. 53 exon of the human DMD gene in the exon reaction solution are shown in SEQ ID NO.1-SEQ ID NO.3;
[0035] The specific primers and probe nucleotide sequences of CFTR gene are shown in SEQ ID NO.4-SEQ ID NO.6;
[0036] PCR master mix: purchased from Nanjing Novizan Biotechnology Co., Ltd., Cat No: Q113-03. Contains hot start Taq enzyme, UNG enzyme, 4 kinds of dNTP, PCR reaction buffer, ROX fluorescent reference dye;
[0037] Negative control substance: including specific plasmid 1 and water, the nucleotide sequence of specific plasmid 1 is shown in SEQ ID No.7; specific plasmid 1 is the artificially synthesized DNA sequence of internal reference CFTR gene...
experiment example
[0049] Using the kit prepared in the above examples, human peripheral blood free DNA or gDNA is used as a sample to detect exon 53 of the human Duchenne / Baissel muscular dystrophy gene DMD gene:
[0050] (1) Nucleic acid extraction:
[0051] The whole blood samples of 2 children with clinical diagnosis of DMD, 2 normal females, and 2 normal males were obtained from a hospital. Use Tianlong Automatic Nucleic Acid Extractor (NP968-3S) and matching Tianlong Whole Blood Genomic DNA Extraction Kit to extract whole blood samples collected in EDTA anticoagulant tubes, and use a micro-ultraviolet spectrophotometer to determine the nucleic acid purity after extraction and concentration, its OD 260 / 280 Between 1.6-2.0; dilute the genomic DNA concentration with sterilized double distilled water to 20ng / μL for later use.
[0052] (2) Dilution of reference substance:
[0053] Dissolve the positive control substance and negative control substance for use.
[0054] (3) The PCR reaction s...
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