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Construction method and application of SSR (Simple Sequence Repeat) molecular fingerprint map of strawberry hybrid

A molecular fingerprint, construction method technology, applied in the application, horticultural methods, botanical equipment and methods, etc., can solve the problems of somatic cell variation, degradation, etc., to maintain excellent characteristics, stable genetic traits of varieties, eliminate vitrification and other problems. The effect of callus formation

Active Publication Date: 2018-02-06
SHANGHAI ACAD OF AGRI SCI
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0006] In the prior art, although in sterile conditions and limited space, a large number of plant seedlings can be rapidly propagated through tissue culture, and strawberry tissue culture micropropagation seedling technology is also relatively common, but in production, tissue culture sources are often encountered. The problem of somatic cell variation of seedlings will cause many problems in production and application, so that many growers would rather use the field propagation route that is susceptible to viral diseases than take the risk of adopting tissue culture micropropagation seedlings. The reason is that somatic cell variation caused by inappropriate tissue culture and micropropagation process will lead to changes in various traits of plants, such as: flowering and fruiting time, fruit appearance, flavor, yield and other traits may change, among them, flowering delay, in production During this period, no flowers or fruit quality degradation is the most common phenomenon

Method used

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  • Construction method and application of SSR (Simple Sequence Repeat) molecular fingerprint map of strawberry hybrid
  • Construction method and application of SSR (Simple Sequence Repeat) molecular fingerprint map of strawberry hybrid
  • Construction method and application of SSR (Simple Sequence Repeat) molecular fingerprint map of strawberry hybrid

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Effect test

Embodiment 1

[0065] The specific process of obtaining the 8 pairs of SSR primer sequences of the present invention and constructing the SSR fingerprint of 'Shenyang' strawberry is as follows:

[0066] First, SSR markers were selected from the Rosaceae genome database website (www.rosaceae.org) in the whole genome and followed the principle of even distribution, and a total of 140 pairs of SSR marker primers were selected and synthesized.

[0067] Afterwards, using the genomic DNA of five strawberry germplasms including 'Shenyang', 'Jiuxiang', 'Hongyan', 'Zhangji' and 'Sweet Charlie' as templates, electrophoresis after PCR amplification confirmed that each pair of SSR marker primers The optimal PCR conditions for amplification and the size range of amplified product fragments; according to the three repeated PCR amplification and electrophoresis analysis of 140 pairs of SSR marker primers in 5 strawberry samples, the non-amplified or overly complicated amplified band patterns, Those primers...

Embodiment 2

[0087] Using the SSR-specific molecular fingerprint of 'Shenyang' strawberry to carry out molecular identification of the strawberry sample to be tested includes the following steps:

[0088] 1) DNA extraction

[0089] For the strawberry population to be identified, after random sampling, every 5 plants were mixed, and at least 5 mixed samples were set up, and deionized water was used as a negative control, and 'Shenyang' strawberry was used as a positive control, and 3 replicates were set up, and strawberries were extracted by CTAB method Genomic DNA, the specific method refers to the master's thesis "Strawberry Anthracnose Resistance Genetic Map Construction and the Cloning and Expression Analysis of Resistance-related Genes" (Li Jing. Nanjing Agricultural University, 2012). After the DNA is analyzed by colorimetry and electrophoresis, it is diluted to 25ng / ul Standby.

[0090] 2) PCR amplification

[0091] Using the DNA extracted in step 1) as a template, use 3 to 8 pair...

Embodiment 3

[0100] A micropropagation method of strawberry hybrid 'Shenyang' comprises the steps:

[0101] 1) Disinfection of explants

[0102] Rinse the stolons of strawberry hybrid 'Shenyang' with running water for more than 2 hours, soak them in 75% ethanol solution for 5 seconds, rinse them with sterile water for 3 times, then disinfect them with 5% sodium hypochlorite solution for 7 minutes, and then rinse them with sterile water 5 times;

[0103] 2) Shoot tip stripping and bud induction

[0104] The growth point of the stem tip is stripped from the sterilized stolon, and the growth point is inoculated in the induction medium at a culture temperature of 23-25° C., cultivated in a shading environment for 2 days, and then cultured under light for 5 days to induce bud germination. Illumination time 12h / d, light intensity 30~50μmol / m 2 s, after 30 days, sterile buds with a length of 0.5-1.0 cm were obtained; the induction medium included: MS basic medium, sucrose 30 g / L, BA 0.5 mg / L, ...

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Abstract

The invention discloses a construction method and application of an SSR (Simple Sequence Repeat) molecular fingerprint map of strawberry hybrid. Eight pairs of SSR primer sequences are screened from 140 pairs of SSR primers which cover the whole genome of strawberries; the SSR molecular fingerprint map of the strawberry hybrid is constructed by utilizing the eight pairs of the SSR primer sequences; the purity of the seedlings of the strawberry hybrid Shenyang, a close relative sib line thereof, a non-near source variety, an excellent line and the like can be authenticated genetically; the SSRmolecular fingerprint map has the characteristics that the specificity is high, the polymorphism is stable, the band type combination is easy to identify and high in dominance, and can authenticate the strawberry hybrid accurately and quickly; moreover, culturing conditions are screened to control a somatic cell mutation risk which is possibly brought by tissue culture; the vitrification and the formation of calluses are stopped; the tissue culture proliferation generation number and the growth coefficient are inhibited; a micropropagation method of the strawberry hybrid Shenyang is determined; the Shenyang strawberry original seedlings with complete varietal purity can be micro-propagated quickly.

Description

technical field [0001] The invention relates to the field of construction of molecular fingerprints of fruit trees, in particular to a construction method and application of SSR molecular fingerprints of strawberry hybrids. Background technique [0002] Strawberry is a perennial plant of the Rosaceae Fragaria genus, an important horticultural economic crop, and ranks second in the world's berry production. Modern cultivated strawberries are allo-octoploid, highly heterozygous, and hybrid crops. Asexual reproduction is necessary to maintain the characteristics of the variety. However, long-term asexual reproduction in the field has buried hidden dangers for the production of strawberries caused by viral diseases. At the same time, it also brings Variety confusion in production. [0003] Strawberry anthracnose is a devastating fungal disease in strawberry seedlings. Through molecular marker-assisted screening, indoor inoculation of suspended spores of pathogenic bacteria, and...

Claims

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Application Information

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IPC IPC(8): C12Q1/6895C12N15/11C12N15/10A01H4/00
CPCA01H4/008C12Q1/6806C12Q1/6895C12Q2600/156
Inventor 高清华段可张玲孙佳欣张丽勍
Owner SHANGHAI ACAD OF AGRI SCI
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