The invention discloses a
drug target affinity prediction method,
electronic equipment and a computer readable storage medium, the method comprises the following steps:
feature extraction is carried out on input
small molecule SMILES and
protein sequences, and the
small molecule adopts 10 molecular fingerprints of RDK, Topological, MACCS, AtomPair, ECFP4, FCFP4, FCFP6, Avalon, Layered and Pattern to construct mixed
fingerprint features; compressing the high-dimensional
molecular fingerprint features to vector dimensions consistent with
protein features through linear mapping to realize feature balance, and splicing to form a fusion
feature vector; and performing nonlinear interaction and expression enhancement on the fusion features by adopting a multi-expert
hybrid module, and finally outputting an affinity prediction value between the
small molecule and the
protein through a
linear regression layer. Through fusion of multi-source chemical fingerprints and deep protein pre-training representation, higher feature expression ability and stronger model generalization are realized; the complexity of the model is reduced through
feature mapping and a lightweight multi-expert
hybrid model, so that the model has better stability and expandability.