Extraction-free direct amplification reagent for real-time fluorescent quantitation PCR and application thereof

A real-time fluorescence quantitative, extraction-free technology, applied in the biological field, can solve a large number of problems, complex operations, etc., to achieve high economic benefits, shorten the process, and improve efficiency

Active Publication Date: 2019-03-01
贝南生物科技(厦门)有限公司
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

At this stage, the nucleic acid extraction of samples mainly adopts the spin column method and the magnetic bead method. Both methods have to go through steps such as lysis, binding, washing, repeated washing, and elution. The operation is complicated and takes 1 to 2 hours. Large amounts of protein allosteric agents and organic solvents are required
At the same time, nucleic acid extraction also requires professional laboratory equipment and environment, and has special requirements for operators.

Method used

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  • Extraction-free direct amplification reagent for real-time fluorescent quantitation PCR and application thereof
  • Extraction-free direct amplification reagent for real-time fluorescent quantitation PCR and application thereof
  • Extraction-free direct amplification reagent for real-time fluorescent quantitation PCR and application thereof

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0037] Example 1: Use of extraction-free direct amplification reagents for influenza A virus nucleic acid detection

[0038] Influenza viruses include Type A, Type B, and Type C. Type A is the most likely to cause an epidemic, followed by Type B, and Type C rarely causes an epidemic. According to the antigenicity of the outer membrane hemagglutinin (HA) and neuraminidase (NA) proteins of viral particles, influenza A viruses can be divided into 16 H subtypes (H1-H16) and 9 N subtypes ( N1-N9). There have been reports of human infections in subtypes such as H1, H2, H3, H5, H7 and H9. Because the nucleotide sequence encoding HA and (or) NA is prone to mutations, the epitopes of HA and (or) NA are changed. This antigenic change makes the population's original specific immunity ineffective, so Type influenza viruses often cause large-scale and even worldwide influenza epidemics. According to the characteristics of the epidemic, the influenza viruses that cause human influenza epidem...

Embodiment 2

[0056] Example 2: Use of extraction-free direct amplification reagents for human papillomavirus nucleic acid typing detection

[0057] Human Papillomavirus (Human Papillomavirus, HPV) belongs to the papillomavirus family. It is a small molecule, non-enveloped 1, circular double-stranded DNA virus with a genome length of about 8000 base pairs (bp), divided into Three functional regions, namely the early transcribed region (E region), late transcribed region (L region) and non-transcribed region (long control region, LCR). HPV infects humans through direct or indirect contact with contaminated items or sexual transmission. The virus is not only host-specific, but also tissue-specific. It can only infect human skin and mucosal epithelial cells, causing various papillomas or warts on human skin and proliferative damage to the epithelium of the reproductive tract.

[0058] For many years, the internationally accepted diagnosis of cervical intraepithelial neoplasia and cervical cancer h...

Embodiment 3

[0075] Example 3: Extraction-free direct amplification reagent combined with freeze-dried reagent for rapid detection of influenza A virus

[0076] Influenza viruses are mainly spread by air droplets, often causing fever, fatigue, muscle aches, and mild to moderate respiratory symptoms. In severe cases, they can cause pneumonia, myocarditis, and heart failure. Influenza virus nucleic acid detection reagents can be used for the auxiliary diagnosis of influenza. At this stage, the operation of influenza virus nucleic acid detection reagents is more complicated, and nucleic acid extraction---amplification reagent preparation---adding samples to the machine---PCR detection is required. process. During the testing period, a large number of professional laboratory equipment is required, and a strict laboratory environment is required to ensure that there is no cross-interference between different samples during the operation. The entire testing process takes 3.5 to 5 hours, which does...

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Abstract

The invention provides an extraction-free direct amplification reagent for real-time fluorescent quantitation PCR and application thereof. The direct amplification reagent comprises the following components: sodium hydroxide (NaOH), Surfactin, dimethyl sulfoxide (DMSO), sucrose and chelex-100. When the reagent is used, there is no need to extract and purify nucleic acid from a sample, only the sample and the reagent need to be mixed according to the equal volume ratio of 1:1. The mixture can be directly used for fluorescent PCR detection. The extraction-free direct amplification reagent is applicable to nucleic acid extraction of human genome, bacteria and viruses in mouth swabs, nasopharyngeal swabs, serum, plasma, genital tract secretion and other samples. The reagent is suitable for both the fluorescence PCR of a probe method and the PCR of a dying method, is suitable for a variety of clinical applications and has the advantages of low cost, simple operation, accurate results and the like, and detection can be simple and quickly completed.

Description

Technical field [0001] The invention belongs to the field of biotechnology, and specifically relates to an extraction-free direct amplification reagent for real-time fluorescent quantitative PCR and its application. Background technique [0002] The polymerase chain reaction (PCR) technology is a simple, fast, highly sensitive, and specific gene amplification method. The process usually includes 20-50 cycles of denaturation, annealing, and extension. The target nucleic acid sequence can be specifically amplified to several million times within 1.5-3 hours. In recent years, due to the emergence of real-time fluorescent PCR machines, ordinary PCR no longer needs gel electrophoresis analysis, which eliminates the need for post-PCR operations and eliminates PCR pollution. At present, real-time fluorescent PCR technology has been widely used in various fields such as infectious disease detection, genetic disease detection, tumor gene mutation detection and so on. [0003] The products...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/686
CPCC12Q1/686C12Q2561/113C12Q2563/107C12Q2545/114
Inventor 童超陈智林魏莎莎高幼冷
Owner 贝南生物科技(厦门)有限公司
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