The invention relates to a Beidou multifunctional timing system. The Beidou multifunctional timing system comprises an antenna module, a satellite receiving module, an NTP module, a time keeping plate module, a B code output module and a motherboard. An output end of the antenna module is connected with the satellite receiving module. The satellite receiving module is connected with the motherboard. The NTP module is connected with the motherboard. The time keeping plate module is connected with the motherboard. The B code output module is connected with the motherboard. The motherboard is connected with each function module. A display control module is connected with the motherboard. A power supply module is connected with the motherboard. According to the invention, high precision time service is realized, multiple NTP output is supported, output of a plurality of kinds of time frequency signals is supported, B code parameters are adjustable, output of messages in RS-232 and RS-485 modes is supported, the Baud rate is configurable, a card-inserting structure is adopted, and the Beidou multifunctional timing system can be widely applied to the fields requiring precise time service, such as a communication system, an electric power system, a digital broadcast television system, a finance system, a meteorology astronomy system, an Internet of Things and special communication.