Application of Leymus chinensis chitinase lcchi2 gene in improving plant cold tolerance
A technology of chitinase and cold resistance, which is applied in the field of application of Leymus chinensis LcChi2 gene in improving plant cold resistance, can solve the problems that the study of Leymus chinensis LcChi2 gene has not been reported, and achieves The method is simple and effective, has good application prospects, and improves the effect of plant cold tolerance
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Embodiment 1
[0069] Example 1: Cloning of Leymus chinensis chitinase LcChi2 gene
[0070] (1) RNA extraction: Leymus chinensis at the three-leaf stage was selected as the experimental material, and it was subjected to 100mM Na 2 CO 3 After treatment, take Leymus chinensis leaves in a mortar and grind them into powder with liquid nitrogen; extract total RNA with RNAiso at room temperature; use microspectrophotometer and agarose gel electrophoresis to detect the quality and purity of total RNA.
[0071] (2) Obtaining the 3'end fragment of LcChi2 gene: Use the SMARTTM RACE cDNA Amplification Kit of Clontech to obtain the 3'end fragment of the Leymus chinensis chitinase LcChi2 gene; according to the esterase gene EST (CD808914) sequence reported on Genbank Information Design of Leymus chinensis chitinase LcChi2 gene 3′-RACE primer, the primer sequence is as follows:
[0072] Forward primer: 5'-CCGACCAGTTCCAATGGGGCT-3'
[0073] 5′-CCGCCGCCAACACCTTCC-3′
[0074] Reverse primer: 5'-GGCCACGCGTCGACTAGTACTTT...
Embodiment 2
[0083] Example 2: Sequence analysis of Leymus chinensis chitinase LcChi2 gene
[0084] Sequence analysis of the LcChi2 gene of Leymus chinensis chitinase: Perform multiple sequence alignment analysis of the LcChi2 gene of Leymus chinensis chitinase with homologous genes in other plants, and use DNAMAN software for sequence comparison. The same in other plants and other plants The accession numbers of the source genes in GenBank are: Hordeum vulgare (CAA55344), Triticum aestivum (BAB82471), Secale cereale (AAG53610) and Capsicum annuum (AAC36359). These four homologous gene sequences are all composed of methionine ( Met) initial.
[0085] Such as figure 1 As shown, the black boxes represent completely identical sequences, the gray boxes represent similar sequences, and the Roman numerals above the black lines represent possible motifs (conserved sequences in biological macromolecules such as DNA, proteins, etc., in the structure of trans-acting factors). Among them, the motif gener...
Embodiment 3
[0086] Example 3: Construction of phylogenetic tree of Leymus chinensis chitinase LcChi2 gene
[0087] Construction of the phylogenetic tree of the chitinase LcChi2 gene of Leymus chinensis: The phylogenetic tree was constructed and evaluated by MEGA 3.1 and Clustal X programs. The construction of a phylogenetic tree can predict or analyze the possible functions of the target gene. For example, the target gene is likely to be the same or similar to the known gene closest to it. Accession number, gene type and species such as figure 2 Shown:
[0088] CAA55344-HvCHI-II: barley chitinase[Hordeum vulgare subsp.vulgare];
[0089] ACV20870-LcChi2: Leymus chitinase[Leymus chinensis];
[0090] BAB82471-TaCHI-II: Wheat chitinase 1[Triticum aestivum];
[0091] AAG53610-ScCHI-II: Rye 24.8kDa class II endochitinase-antifreezeprotein precursor [Secale cereale];
[0092] AAC36359-CaCHI-II: chitinase class II [Capsicum annuum];
[0093] BAD77932-CjCHI-IV: Cryptomeria fortunei class IV chitinase[Crypt...
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