Pyroglutamyl peptidase and its gene
a technology of pyroglutamyl peptidase and pyroglutamyl peptide, which is applied in the field of pyroglutamyl peptidase, can solve the problems of low amino acid release rate, inability to isolate pyroglutamyl peptidase, and inability to bind filamentous proteins, and achieve the effect of efficient cultur
- Summary
- Abstract
- Description
- Claims
- Application Information
AI Technical Summary
Benefits of technology
Problems solved by technology
Method used
Examples
example 1
Method of Producing Whole Genome Shot Gun Library
1. Production of Insert DNA
(1) Obtainment f Chromosomal DNA
[0151] Spores of filamentous fungus Aspergillus oryzae RIB 40 (ATCC No. 42149) were inoculated into a YPD medium (0.5% yeast extract, 1% peptone, 2% glucose), and the mixture was subjected to a shaking culturing at 30° C. overnight. Thereafter, genomic DNA was extracted in accordance with the method of Iimura [Agric. Biol. Chem., 51, 323 (1987)]. Mitochondrial DNA that had existed with the genomic DNA was purified by cesium chloride ultracentrifugation in accordance with the method of Watson et al. [Methods Enzymol., 118, 57 (1986)], so as to obtain only chromosomal DNA.
(2) Fragmentation of Chromosomal DNA
[0152] Using a random DNA fragmentation device HydroShear (Tomy Seiko Co., Ltd.), the obtained pure chromosomal DNA was degraded into fragments with a size of approximately 1 to 2 kb.
(3) Treatment of Fragmented DNA Termini
[0153] The fragmented chromosomal DNA was t...
example 2
Identification of Gene
[0157] Identification of gene from the nucleotide sequence of the genomic DNA was carried out using, in combination, a gene finding system GeneDecoder based on the algorithm according to Kiyoshi Asai et al. [Pacific Symposium on Biocomputing, 98, 228 (1998)] and a gene finding system ALN based on the algorithm according to Osamu Goto [Bioinformatics, 16, 190-202 (2000)] to the contigs of the nucleotide sequence of the genomic DNA, while taking into consideration the EST sequence information that had already been obtained, and information regarding homology to the known protein amino acid sequence database, by applying the methods according to the following (1) to (7).
(1) Extraction of BLAST Homologous Gene Candidate Regions
[0158] A region having a high homology with the amino acid sequence of a known protein is extracted from the contigs of the nucleotide sequence of the genomic DNA. The homology of an amino acid sequence can be determined by the algorithm ...
example 3
Cloning of Pyroglutamyl Peptidase cDNA of Aspergillus Oryzae
(1) Preparation of cDNA of Aspergillus Oryzae RIB 40 Strain
[0169]Aspergillus oryzae RIB 40 strain was cultured under the following conditions. This is to say, this strain was inoculated into 60 ml of a DPY medium (2% dextrin, 2% polypeptone, 0.5% yeast extract, 0.5% monopotassium phosphate, 0.05% magnesium sulfate 7 hydrates), and the mixture was placed in a 300 ml Erlenmeyer flask with a baffle, followed by a shaking culturing at 30° C. at 150 rpm for 2 days. Thereafter, the culture was filtrated, and 1 g of the obtained wet cell bodies was transferred into a mortar containing liquid nitrogen, so that the cell bodies were frozen by the liquid nitrogen. Thereafter, the cell bodies were ground with a pestle into fine powders.
[0170] Total RNA was obtained from this fine powders, using an RNeasy Midi Kit manufactured by Qiagen.
[0171] From the obtained total RNA, 100 μL of 0.6 μg / ml mRNA solution was obtained, using an Oli...
PUM
Property | Measurement | Unit |
---|---|---|
pH | aaaaa | aaaaa |
pH | aaaaa | aaaaa |
temperature | aaaaa | aaaaa |
Abstract
Description
Claims
Application Information
- R&D Engineer
- R&D Manager
- IP Professional
- Industry Leading Data Capabilities
- Powerful AI technology
- Patent DNA Extraction
Browse by: Latest US Patents, China's latest patents, Technical Efficacy Thesaurus, Application Domain, Technology Topic, Popular Technical Reports.
© 2024 PatSnap. All rights reserved.Legal|Privacy policy|Modern Slavery Act Transparency Statement|Sitemap|About US| Contact US: help@patsnap.com