The invention discloses an automatic pipeline for blood cell analysis and POCT immunoassay, and the pipeline comprises a rack, a first conveying platform, a first mixing device, a first sampling mechanism, a first detector with an analyzing device, a first unloading platform, a first conveying device, a second conveying platform, a relay mechanism, a second mixing device, a second sampling mechanism and a fluorescent immunoassay analyzer with a plurality of test channels, wherein the automatic pipeline for blood cell analysis and POCT immunoassay with the above structure organically combines blood cell analysis and fluorescence immunoassay to achieve detection of blood cells and POCT immunization programs, and the plurality of test channels using the fluorescent immunoassay analyzer can freely combine different test items, thereby providing versatility and expandability, shortening sample detection cycle, improving efficiency, reducing manual intervention and reducing error rates.