Kit for simultaneously detecting six common porcine viruses in Fukuotou raw material and product of Fukuotou raw material
A kit and virus technology, applied in the field of biochips, can solve problems that have not been reported, and achieve the effects of improving detection sensitivity, detection efficiency and accuracy, and ensuring specificity and accuracy
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Embodiment 1
[0074] Embodiment 1 kit preparation process
[0075] 1. Bioinformatics analysis and specific primer screening
[0076] Search different porcine virus genome sequences, perform systematic sequence comparison through DNA MAN, NCBI BLAST, DNA STAR and other software, select conservative and specific genes or sequences as detection objects, and then use primer6 or oligo7 and other software to design multiple pairs of specific primers , and further comparative analysis was carried out in the primers of the software, and primers with small interactions between primers were selected for synthesis and testing. .
[0077] 2. Sample preparation
[0078] For the extraction of total nucleic acid (including DNA and RNA) of the sample, the viral genome DNA / RNA extraction kit (or other extraction methods or kits with equivalent efficacy) can be used to extract the total nucleic acid, and Concentration quantitative analysis was performed.
[0079] 3. PCR primer specificity test
[0080] ...
Embodiment 2
[0139] According to the instructions of Tiangen Biochemical Technology (Beijing) Co., Ltd. Viral DNA / RNA Extraction Kit (Product No.: DP315), the total nucleic acids of 6 kinds of porcine virus standard samples were extracted respectively. The concentration and quality of the extracted total nucleic acid were measured by an ultra-micro spectrophotometer (NanoDrop2000), and then PCR samples were added to test the amplification efficiency and specificity of each primer.
[0140] The reaction system of PCR amplification is as follows:
[0141] 2×RT-Multiplex PCR Master Mix: 10 μL;
[0142] Alternative primers for each target (10μM): 0.5μL
[0143] Alternative primers for each target (10μM): 0.5μL
[0144] Extracted sample total nucleic acid: 2-5 μL;
[0145] wxya 2 O: Make up to a total volume of 20 μL;
[0146] After the amplification, gel electrophoresis was performed to detect the amplified target band. Primers with good specificity and high amplification efficiency (that ...
Embodiment 3
[0148] Preparation of multiplex reaction system: use primer pairs 1-7 to prepare multiplex RT-PCR primer Mix, and the final concentration of each primer is 10 μM. Add 0.4 μL of prepared Primer Mix to each 20 μL reaction system, so the final working concentration of each primer in the reaction system is 0.2 μM.
[0149] Nucleic acid extraction: According to the instructions of Tiangen Biochemical Technology (Beijing) Co., Ltd. Viral DNA / RNA Extraction Kit (Cat. No.: DP315), the total nucleic acids of the six porcine virus standard samples were extracted respectively. The concentration of the extracted total nucleic acid was measured with an ultramicro spectrophotometer (NanoDrop2000), and the above nucleic acid was gradiently diluted to an intermediate concentration (about 1.0E+04copies / μL) with enzyme-free water for PCR loading.
[0150] The reaction system of PCR amplification is as follows:
[0151] 2×RT-Multiplex PCR Mix (including Primer Mix): 10.4μL;
[0152] Extracted ...
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