Supercharge Your Innovation With Domain-Expert AI Agents!

Loop-mediated isothermal amplification primer group of plesimonas shigelloides, nucleic acid test strip kit and detection method

A loop-mediated isothermal, nucleic acid test strip technology, applied in the biological field, can solve the problems of time-consuming culture conditions, poor repeatability of results, and easy misjudgment of microbial culture methods, and achieves easy wide-scale popularization and application, simple operation, and specificity. good effect

Inactive Publication Date: 2018-05-04
FOSHAN UNIVERSITY
View PDF1 Cites 0 Cited by
  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

The microbial culture method is time-consuming and the culture conditions are complicated; the interpretation of physiological and biochemical identification results depends on the subjective judgment of the operator, resulting in poor repeatability of the results and easy misjudgment; molecular detection such as PCR and real-time fluorescent PCR technology requires expensive equipment and technology High standard
Due to their respective defects, most of the conventional pathogen detection technologies are not suitable for on-site rapid detection at the grassroots level

Method used

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
View more

Image

Smart Image Click on the blue labels to locate them in the text.
Viewing Examples
Smart Image
  • Loop-mediated isothermal amplification primer group of plesimonas shigelloides, nucleic acid test strip kit and detection method
  • Loop-mediated isothermal amplification primer group of plesimonas shigelloides, nucleic acid test strip kit and detection method
  • Loop-mediated isothermal amplification primer group of plesimonas shigelloides, nucleic acid test strip kit and detection method

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0030] Example 1: LAMP reaction of P. shigella-like.

[0031] The reaction system of LAMP is 25 μl: add 2 μl of bacterial solution template, 2.5 μl of 10× buffer, MgSO 4 (100mmol / L) 1.5μl, 0.5ul primers F3 and B3, 5ul primers FIP and BIP, 2ul primers LF and LB, dNTP (10mmol / L) 3.5μl, Bst DNA polymerase (8U / μl) 1μl, Betaine (betaine) 2.5μl, ddH 2 O make up to 25 μl. Amplify at 64°C for 40min. The products amplified by LAMP were detected with nucleic acid test strips.

[0032] The nucleic acid test strip detection device used was purchased from Hangzhou Ustar Biotechnology Co., Ltd.

Embodiment 2

[0033] Example 2: Specificity experiment of the LAMP nucleic acid test strip detection kit for P. shigella-like bacteria.

[0034] Bacterial strains used in the test: fish-derived pathogenic P. shigella, coded a1; Aeromonas victorii, coded a2; Aeromonas sobria, coded a3; Aeromonas hydrophila, coded is a4; Aeromonas caviae, coded a5; Citrobacter fischeri, coded a6; Flavobacterium columnar, coded a7; Pseudomonas putida, coded a8; Pseudomonas aeruginosa, coded a9 ; Klebsiella pneumoniae, coded a10; Edwardsiella tarda, coded a11; Shewanella putrefaciens, coded a12; Vibrio anguillarum, coded a13; Vibrio alginolyticus, coded a14; Vibrio parahaemolyticus , numbered a15; Vibrio cholerae, numbered a16.

[0035] Culture of bacterial strains: Pseudomonas shigella, Aeromonas victoria, Aeromonas sobria, Aeromonas hydrophila, Aeromonas caviae, Citrobacter fischeri, Pseudomonas putida, Pseudomonas aeruginosa, Klebsiella pneumoniae, Edwardsiella tarda, and Shewanella putrefaction were cultu...

Embodiment 3

[0037] Example 3: Sensitivity experiment of the LAMP nucleic acid test strip detection kit for P.shigella-like bacteria.

[0038] A trace nucleic acid analyzer was used to measure the concentration of the P. shigella-like template, and then a 10-fold serial dilution was performed. For different concentrations of templates, each concentration was repeated three times for LAMP amplification, and the detection of nucleic acid test strips showed that the template concentration was 2×10 -7 At μg / μl, two clear red bands can also be observed, one in the quality control area (C line) and one in the detection area (T line), indicating that the lowest concentration of the template that can be detected by the LAMP reaction is 2×10 -7 μg / μl, where 1 is the DNA Marker, and the concentrations of P. shigella-like templates in samples b1-b10 are 20 μg / μl, 2 μg / μl, and 2×10 -1 μg / μl, 2×10 -2 μg / μl, 2×10 -3 μg / μl, 2×10 -4 μg / μl, 2×10 -5 μg / μl, 2×10 -6 μg / μl, 2×10 -7 μg / μl, 2×10 -8 μg / μl...

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
Login to View More

PUM

No PUM Login to View More

Abstract

The invention discloses a loop-mediated isothermal amplification primer group of plesimonas shigelloides, a nucleic acid test strip kit and a detection method. The detection method comprises the following steps: (1) treating a sample; (2) treating a primer; (3) performing loop-mediated isothermal amplification reaction; and (4) detecting a nucleic acid test strip. The primer group is as follows: apair of inner primers, a pair of outer primers and a pair of loop primers are designed according to the sequence of a hugA gene which is one of important genes of an encoding plesimonas shigelloidesferroheme iron ion utilizing system, and 8 independent areas on a target sequence can be identified specifically. The kit can detect the plesimonas shigelloides rapidly and sensitively, an expensive instrument is not needed, reaction can be completed within one hour only by one constant-temperature water bath pot, operation is simple, cost is low, the reaction result is easy to observe, the specificity is high, and the kit is very suitable for on-site detection of export quarantine, a primary laboratory and a farm and easy to popularize and apply extensively.

Description

technical field [0001] The present invention relates to the field of biotechnology. Background technique [0002] Plesiomonas shigelloides is a Gram-negative, aerobic or facultatively anaerobic, oxidase-positive, motile bacillus that has been associated with human pathogenic Vibrio and Aeromonas It belongs to Vibriaceae together, and later studies found that it is closer to P. shigella and Proteus at the molecular level. In the second edition of "Bergey's Handbook of Systematic Bacteriology", P. shigella Bacteria were assigned to the Enterobacteriaceae, Proximonas genus. [0003] P.shigella-like is an important enteroinflammatory pathogen in humans, which can cause symptoms such as acute gastroenteritis and diarrhea in humans, and can also cause sepsis, meningitis, septic arthritis, osteomyelitis, peritonitis, cellulitis and pneumonia Symptoms of extraintestinal infection. [0004] P.shigella-like bacteria are widely distributed in nature, especially in aquatic ecological...

Claims

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
Login to View More

Application Information

Patent Timeline
no application Login to View More
Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/689C12Q1/6844C12N15/11C12R1/01
CPCC12Q1/6844C12Q1/689C12Q2531/119C12Q2565/625
Inventor 于辉彭钟琴刘华杨映李东琦谭淑雯
Owner FOSHAN UNIVERSITY
Features
  • R&D
  • Intellectual Property
  • Life Sciences
  • Materials
  • Tech Scout
Why Patsnap Eureka
  • Unparalleled Data Quality
  • Higher Quality Content
  • 60% Fewer Hallucinations
Social media
Patsnap Eureka Blog
Learn More