Loop-mediated isothermal amplification primer group of plesimonas shigelloides, nucleic acid test strip kit and detection method
A loop-mediated isothermal, nucleic acid test strip technology, applied in the biological field, can solve the problems of time-consuming culture conditions, poor repeatability of results, and easy misjudgment of microbial culture methods, and achieves easy wide-scale popularization and application, simple operation, and specificity. good effect
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Embodiment 1
[0030] Example 1: LAMP reaction of P. shigella-like.
[0031] The reaction system of LAMP is 25 μl: add 2 μl of bacterial solution template, 2.5 μl of 10× buffer, MgSO 4 (100mmol / L) 1.5μl, 0.5ul primers F3 and B3, 5ul primers FIP and BIP, 2ul primers LF and LB, dNTP (10mmol / L) 3.5μl, Bst DNA polymerase (8U / μl) 1μl, Betaine (betaine) 2.5μl, ddH 2 O make up to 25 μl. Amplify at 64°C for 40min. The products amplified by LAMP were detected with nucleic acid test strips.
[0032] The nucleic acid test strip detection device used was purchased from Hangzhou Ustar Biotechnology Co., Ltd.
Embodiment 2
[0033] Example 2: Specificity experiment of the LAMP nucleic acid test strip detection kit for P. shigella-like bacteria.
[0034] Bacterial strains used in the test: fish-derived pathogenic P. shigella, coded a1; Aeromonas victorii, coded a2; Aeromonas sobria, coded a3; Aeromonas hydrophila, coded is a4; Aeromonas caviae, coded a5; Citrobacter fischeri, coded a6; Flavobacterium columnar, coded a7; Pseudomonas putida, coded a8; Pseudomonas aeruginosa, coded a9 ; Klebsiella pneumoniae, coded a10; Edwardsiella tarda, coded a11; Shewanella putrefaciens, coded a12; Vibrio anguillarum, coded a13; Vibrio alginolyticus, coded a14; Vibrio parahaemolyticus , numbered a15; Vibrio cholerae, numbered a16.
[0035] Culture of bacterial strains: Pseudomonas shigella, Aeromonas victoria, Aeromonas sobria, Aeromonas hydrophila, Aeromonas caviae, Citrobacter fischeri, Pseudomonas putida, Pseudomonas aeruginosa, Klebsiella pneumoniae, Edwardsiella tarda, and Shewanella putrefaction were cultu...
Embodiment 3
[0037] Example 3: Sensitivity experiment of the LAMP nucleic acid test strip detection kit for P.shigella-like bacteria.
[0038] A trace nucleic acid analyzer was used to measure the concentration of the P. shigella-like template, and then a 10-fold serial dilution was performed. For different concentrations of templates, each concentration was repeated three times for LAMP amplification, and the detection of nucleic acid test strips showed that the template concentration was 2×10 -7 At μg / μl, two clear red bands can also be observed, one in the quality control area (C line) and one in the detection area (T line), indicating that the lowest concentration of the template that can be detected by the LAMP reaction is 2×10 -7 μg / μl, where 1 is the DNA Marker, and the concentrations of P. shigella-like templates in samples b1-b10 are 20 μg / μl, 2 μg / μl, and 2×10 -1 μg / μl, 2×10 -2 μg / μl, 2×10 -3 μg / μl, 2×10 -4 μg / μl, 2×10 -5 μg / μl, 2×10 -6 μg / μl, 2×10 -7 μg / μl, 2×10 -8 μg / μl...
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