The invention relates to an intelligent desktop-level three-dimensional diagnosis system for complex intra-articular fractures. The system comprises an image acquisition module, an image processing module, a three-dimensional reconstruction module and a display module which are connected in sequence. On one hand, under the assistance of an artificial intelligence algorithm, interested fracture data are automatically, rapidly and accurately extracted, and an interactive three-dimensional reconstruction image is generated; and on the other hand, a common low-configuration computer is allowed tocarry out reconstruction operation, so that a clinician can conveniently identify the three-dimensional form of the fracture before and during an operation and formulate a more detailed and accurate operation scheme, thereby shortening the operation time, reducing bleeding during the operation and improving the operation curative effect.