The invention discloses a method, device and equipment for predicting the property of a
mutant protein, and the method comprises the steps: carrying out the fusion
processing of the embedding characteristics and physicochemical characteristics of an original
protein, the embedding characteristics and physicochemical characteristics of the
mutant protein generated by the
mutation of the original protein, and the interaction characteristics of residues of the
mutant protein, obtaining initial node characteristics of the
mutant protein; the interaction characteristic represents the interaction between every two residues in the
mutant protein; the embedded feature represents an
amino acid sequence of the protein, the physicochemical feature represents physicochemical properties of residues forming the protein, and a prediction model is used for
processing initial node features and structural features of the original protein so as to predict multiple properties of the
mutant protein; and predicting model loss of the model, wherein the model loss is determined according to a sample property predicted value representing multiple properties and a plurality of sample property measured values of the sample, wherein the sample property predicted value and the sample property measured values are obtained by the prediction model.