The invention discloses an intelligent optimized scheduling system for logistics. The system is composed of a basic data module, an intelligent scheduling module and a board management module. The basic data module consists of a line management unit, a vehicle type management unit, an address management unit, a car pooling rule unit, a scheme design unit, a transport capacity management unit, a data dictionary unit, and an area management unit. The intelligent scheduling module is used for realizing the complete intelligent scheduling function and is mainly responsible for order extraction and scheduling calculation, carrying out examination on a calculation result, carrying out proper arrangement after successful examination, and writing back to a TMS. The board management module mainly includes an arrangement checking unit and a TMS uploading instruction checking unit; the arrangement checking unit is used for realizing a function of real-time arrangement situation checking of a warehouse in the system; and the TMS uploading instruction checking unit is used for realizing a function of uploading instruction checking. According to the system, the inventory, manpower and transport costs can be lowered; the punctual delivery ratio can be improved; the profitable operation can be realized; and the competitive advantage can be obtained.