The invention discloses a biodiversity evaluation report automatic generation method, comprising the following steps: evaluation report templates for evaluating biodiversity are set according to requirements, and the evaluation report templates are numbered and stored; when a user inputs a creation demand, the system accesses different evaluation report templates according to requirements, adoptsAjax, Redis, Spring Batch, Apache Storm, Apache Spark and other technologies to call data of species, specimens, animal and plant gardens, ecological environments, vegetation communities, conservation, ecological products and biological enterprises from a collected database and carries out real-time cloud-based parallel computing, so as to return the final dynamic data to the report template to obtain a biodiversity assessment report. According to the biodiversity evaluation report automatic generation method, the evaluation report can be automatically generated, and a large amount of labor cost is saved, and the time cost is saved, and the problem of data omission is avoided, and the calculation is more accurate and efficient, and the working efficiency is improved.