This application relates to the field of
data processing technology, and in particular to a method,
system, device, medium, and product for generating rheumatoid and immunological test reports. The method includes receiving a VCF file from NGS sequencing, a report output
directory, and a report output template to generate an
order number; naming the VCF file,
patient information file,
quality control parameter file, and filter parameter file according to a naming convention including the
order number, and saving them to the report output
directory; extracting
patient information,
quality control parameters, filter thresholds, and a
list of target rheumatoid and
immunological diseases, and combining the paths of relevant files to generate, verify, and save a configuration file containing the
order number to the report output
directory; starting a Docker container to analyze the VCF file, and automatically filling the analysis results,
patient information, and
quality control parameters into the report output template, generating and saving a rheumatoid and immunological
test report containing the order number to the report output directory, thus achieving
fully automated generation and analysis from
data input to result output.