Provided is a control system working mode setting and switching method based on information fusion. An existing method that a control system working pattern and mode is designed according to functions and the using conditions of a sensor is converted to a method that the control system working pattern and mode is determined according to the functions. The working pattern is designed as a sun capturing and cruising pattern, an earth capturing and pointing pattern, an apogee pattern, a position keeping pattern and a normal pattern (including a normal working mode, a counteractive wheel disassembling working mode, a north and south position keeping working mode and an east and west position keeping working mode). The patterns can be autonomously switched on a satellite or be switched in a remote-control mode from the ground. According to the method, pattern designing and switching conditions are optimized, the number of control patterns is reduced, conversion relation between the patterns is simplified, complex degree of ground observation and control is lowered, the using number of software codes is lowered, and the performance of a control system is improved.