The invention discloses a combiner box automatic pairing testing system and a testing tool thereof. The combiner box automatic pairing testing system comprises a direct voltage testing part, a direct voltage testing part, and a testing tool used for fixed installation of tested work pieces constituted by measuring plates and manifolds. The testing tool comprises a base, which is provided with a group of spring testing needles used for conductive inserted connection with terminals of tested work pieces during the test. Each spring testing needle comprises an input spring testing needle and an output spring testing needle. The base is also provided with a pressing mechanism used for pressing the tested work pieces tightly, after the tested work pieces are disposed on the spring testing needles. During the use, the to-be-tested work pieces are directly connected with the spring testing needles disposed on the base in an inserted manner, and the conductive connection between the corresponding terminals of the to-be-tested work pieces and the spring testing needles is completed. The bottom parts of the spring testing needles are connected with a voltage source or a current source by leads, and then during the test, the tested work pieces are only required to be connected with the spring testing needles in an inserted manner, and wiring operation is saved, and therefore testing efficiency is improved.