The invention discloses organic-inorganic hybrid cross-linked heat-conducting silica gel, which is prepared from the following raw materials: vinyl silicone oil, hydrogen-containing silicone oil, dimethyl silicone oil, chemically modified inorganic filler, copper powder, white carbon black, graphene, a catalyst and an inhibitor. The organic-inorganic hybrid cross-linked heat-conducting silica gel comprises the following components in percentage by weight: 30%-35% of vinyl silicone oil, 5%-8% of hydrogen-containing silicone oil, 2%-5% of dimethyl silicone oil, 35%-40% of chemically modified inorganic filler, 15%-20% of copper powder, 1%-5% of white carbon black, 0.1%-0.3% of graphene, 0.02%-0.06% of a catalyst and 0.005%-0.01% of an inhibitor, wherein the chemically modified inorganic filler is obtained by modifying a to-be-modified inorganic filler with a coupling agent. The to-be-modified inorganic filler is modified through the coupling agent, the surface of the to-be-modified inorganic filler is modified to enable the to-be-modified inorganic filler to have double-bond functional groups the same as those of a matrix, the filler and the matrix are connected together in a chemical bond mode through the hydrosilylation effect, through connection of the chemical formula, sedimentation of the filler can be effectively improved, and the construction of a whole heat-conducting passage of the system is facilitated.