The invention provides a primer for detecting a rectal-cancer-susceptibility-related SNP site .The primer includes a C11orf93 gene rs3802842 site primer, an SMAD7 gene rs4939827 site primer, a POU5F1B gene rs6983267 site primer and an RNA5SP229 gene rs10795668 site primer .A method for detecting the rectal-cancer-susceptibility-related SNP site with the primer includes the following steps that 1, samples are collected, and DNA is extracted; 2, target genes are subjected to PCR amplification and gel recovery through the four primers respectively; 3, the gel recovery products are subjected to concentration measurement and PCR amplification and purified; 4, the purified products are subjected to sample loading, and the SNP detecting results are analyzed .The primer is good in specificity, high in sensitivity and good in accuracy, the detection method is simple, and the rectal-cancer suffering risk of a detected patient can be forecasted.