The invention discloses a method for separating urokinase from a human urinary trypsin inhibitor. The method comprises the following steps: regulating pH of a solution containing the urokinase and the human urinary trypsin inhibitor; slowly adding ammonium sulfate powder while stirring until the solution generates obvious protein precipitation; regulating the pH to 9.0 plus or minus 0.6; after standing, centrifuging or adding diatomite for filtering, collecting the precipitation rich in the urokinase, and obtaining the urokinase; continuing to adding ammonium sulfate into supernatant while stirring to dissolve the ammonium sulfate; and after standing, centrifuging or adding diatomite for filtering, collecting the precipitation 2 rich in the human urinary trypsin inhibitor, and obtaining the human urinary trypsin inhibitor. The method is simple, convenient and feasible and has a short period, the UK and UTI activity is effectively protected, the UK degradation is reduced, the UK quality is increased, special equipment is not needed, and the invested cost of the equipment is reduced.