The invention belongs to the field of electric vehicle charging and electrical changing, and particularly provides a modular control system and method of an electric vehicle electrical changing station. The system and method aim to solve the problem that equipment of an existing electrical changing station is complex and accordingly production, wiring, debugging and upgrading of the electrical changing station are tedious. The modular control system comprises an overall control module, a parking platform control module, an electrical changing trolley control module, a battery storage charging frame control module, a battery bin elevator control module, a communication module and a man-machine interaction module. Due to collaborative operation of the control modules, full-automatic electrical changing operation of the electrical changing station can be achieved. By means of the modular control system, the control modules can be independently debugged and tested, and wiring, wire distribution, production debugging, compatible extension and optimization and upgrading maintenance of a system are convenient.