The present invention provides methods and materials related to the detection of colorectal 
neoplasm-specific markers (e.g., markers associated with 
colorectal cancer, markers associated with 
adenoma) in or associated with a subject's 
stool sample. In particular, the present invention provides methods and materials for identifying mammals (e.g., humans) having a colorectal 
neoplasm by detecting the presence and level of indicators of colorectal neoplasia such as, for example, long 
DNA (e.g., quantified by Alu PCR) and the presence and level of tumor-associated 
gene alterations (e.g., mutations in 
KRAS, APC, 
melanoma antigen gene, p53, BRAF, BAT26, PIK3CA) or epigenetic alterations (e.g., 
DNA methylation) (e.g., CpG 
methylation) (e.g., CpG 
methylation in coding or regulatory regions of bmp-3, bmp-4, SFRP2, 
vimentin, septin9, ALX4, EYA4, TFPI2, NDRG4, FOXE1) in 
DNA from a 
stool sample obtained from the 
mammal.