The invention relates to a method for continuously authenticating mobile equipment in a mobile communication system. The steps are as follows: a system module which can be partially observed in the Markov decision process is built, the information states of information state space and each discrete time point are defined, a cumulative cost model is built, the corresponding relation between the information states and an optimal biological specificity authentication functional module is calculated, the optimal biological specificity authentication functional module is obtained on the basis of historical information, the next authentication is dispatched to perform, the information output at the next time point is observed, the information state of the system is updated and hereby, the authentication result is judged. The method for continuously authenticating mobile equipment in the mobile communication system ensures the optimization of the performance of the system, greatly improves the security of the mobile equipment, satisfies the requirements of users having very high requirements for the security of the mobile equipment, saves system resources and system operation cost, has stable and reliable working performance, wider application range and lays a strong foundation for the further development of the information safety technique of the mobile equipment.