The invention discloses a heterogeneous wireless network cooperation coexistence method based on coordination busy tone intelligent protection. Targeting a heterogeneous network coexistence problem, the heterogeneous wireless network cooperation coexistence method designs an intelligent coordination busy tone protection strategy, and covers multiple dimensions like frequency, time, space, power, etc. On one hand, the heterogeneous wireless network cooperation coexistence method is compatible with TDMA, CSMA and a mixed access mechanism through early warning and parallel protection, and, on the other hand, the heterogeneous wireless network cooperation coexistence method avoids a monitoring dead zone problem of the coexistence network, expands monitoring ranges of multiple kinds of coexistence networks and network cooperation optimized information quantity; based on an internetwork disturbance classification method of disturbance decoupling and based on a standard that whether the various kinds of networks can monitor a counter party, the heterogeneous wireless network cooperation coexistence method avoids problems of thinking too much or not considering all about the co-existing interference; a busy tone channel is chosen according to a two-end rule and a left-right rule; and on the basis of low expenditure interference signal characteristic extraction, the heterogeneous wireless network cooperation coexistence method performs reasonable protection on a weak network in a coexistence environment and improves comprehensive performance of the coexistence network.