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Methods and apparatuses for interactive similarity searching, retrieval and browsing of video

Methods for interactive selecting video queries consisting of training images from a video for a video similarity search and for displaying the results of the similarity search are disclosed. The user selects a time interval in the video as a query definition of training images for training an image class statistical model. Time intervals can be as short as one frame or consist of disjoint segments or shots. A statistical model of the image class defined by the training images is calculated on-the-fly from feature vectors extracted from transforms of the training images. For each frame in the video, a feature vector is extracted from the transform of the frame, and a similarity measure is calculated using the feature vector and the image class statistical model. The similarity measure is derived from the likelihood of a Gaussian model producing the frame. The similarity is then presented graphically, which allows the time structure of the video to be visualized and browsed. Similarity can be rapidly calculated for other video files as well, which enables content-based retrieval by example. A content-aware video browser featuring interactive similarity measurement is presented. A method for selecting training segments involves mouse click-and-drag operations over a time bar representing the duration of the video; similarity results are displayed as shades in the time bar. Another method involves selecting periodic frames of the video as endpoints for the training segment.
Owner:FUJIFILM BUSINESS INNOVATION CORP +1

Protein modeling tools

InactiveUS20030130797A1Rapid and computationally efficient generationEfficient representationDepsipeptidesPeptide preparation methodsProtein modellingSide chain
The invention provides a new, efficient method for the assembly of protein tertiary structure from known, loosely encoded secondary structure constraints and sparse information about exact side chain contacts. The method is based on a new method for the reduced modeling of protein structure and dynamics, where the protein is described by representing side chain centers of mass rather than alpha-carbons. The model has implicit, built-in multi-body correlations that simulate short- and long-range packing preferences, hydrogen bonding cooperativity, and a mean force potential describing hydrophobic interactions. Due to the simplicity of the protein representation and definition of the model force field, the Monte Carlo algorithm is at least an order of magnitude faster than previously published Monte Carlo algorithms for three-dimensional structure assembly. In contrast to existing algorithms, the new method requires a smaller number of tertiary constraints for successful fold assembly; on average, one for every seven residues as compared to one for every four residues. The reliability and robustness of the invention make it useful for routine application in model building protocols based on various (and even very sparse) experimentally-derived structural constraints.
Owner:SKOLNICK JEFFREY +1
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