This invention belongs to the field of biological detection technology, and particularly relates to a
reproductive tract HPV-mRNA-E6 / E7 detection
system and method based on
nanopore sequencing. The
system includes a sample pretreatment module, an
RNA extraction and purification module, a reverse transcription module, a
nanopore sequencing module, and a
bioinformatics analysis module. The method includes the following steps: (1)
reproductive tract sample collection and pretreatment; (2) extraction and purification of HPV-mRNA in the sample; (3) reverse transcription of the purified HPV-mRNA into cDNA; (4)
nanopore sequencing of the cDNA to obtain raw
sequencing data; (5) filtering, comparing, and annotating the
sequencing data through the
bioinformatics analysis module to achieve HPV type identification and quantitative analysis of E6 / E7
gene expression levels. This invention utilizes the advantages of
nanopore sequencing, such as long read length and real-time detection, combined with the specificity of E6 / E7 mRNA as a biomarker of active infection. It can directly detect latent and active
HPV infection, improve detection sensitivity, accurately distinguish
infection types, and shorten the detection cycle. It enables rapid, accurate, and high-
throughput detection of active
HPV infection in the
genital tract, providing reliable
technical support for early screening,
disease monitoring, and prognostic assessment of HPV-related diseases such as
cervical cancer.